Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g2076 | ATGGCGAGTGAAGGTGGTAAGAAACTAACTGAAGATGATGCCTTAGCATTTCTTAAGGCAGTCAAGGATGTTTTCAAAGATGAAGAGGAAAATTTTAATTACTTTATGGAAATAATGATTGATTACAGAGAAAAAAGAATTTATTTCGATGATCTTATGACGAAGGTGAAGGAGTTATTTAAAGGACACGACGATCTAATTATAGGATTTAACATCTTTGCACCAAGTGATTATCAAATCCAAGTTTCACAAGAAGAAGAACAGCAACCTCAAAATAGGATTGTTGACGAATATCAAATGACAACTCCATTAGAAGAAGCAAAAGCTATTGTTGCACAATCTCCTCATATGATGCTTGGTGGAGATAATCTCAATGTGGCTCCATCAAGGAATGAACCATGTCCAATGAGAAAACTTGGTGGATACGAAGATGCTACAAAGTTTGTGAGCAAGATTAAGACTCGGTTTGAAGGAGATGGCCATGCTTACAAGTCATTTCTCAACATCATGAACATGTTGGGTGAGGGGAAAAAACCTTACACCGATACTTACCATGAGGTTGTTGCACTTTTCGAAGGTCATGCAGATCTTCTTGATGAGTTAATTCAGTTTTTTCCCGGCACTTCAAAAGTAGAAGCGTCTACTCAAAATATATGA | 657 | 0.3683 | MASEGGKKLTEDDALAFLKAVKDVFKDEEENFNYFMEIMIDYREKRIYFDDLMTKVKELFKGHDDLIIGFNIFAPSDYQIQVSQEEEQQPQNRIVDEYQMTTPLEEAKAIVAQSPHMMLGGDNLNVAPSRNEPCPMRKLGGYEDATKFVSKIKTRFEGDGHAYKSFLNIMNMLGEGKKPYTDTYHEVVALFEGHADLLDELIQFFPGTSKVEASTQNI* | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g2076 | 218 | Gene3D | Paired amphipathic helix | 13 | 75 | IPR036600 | GO:0006355 | |
Tpr7g2076 | 218 | SUPERFAMILY | PAH2 domain | 7 | 75 | IPR036600 | GO:0006355 | |
Tpr7g2076 | 218 | Pfam | Paired amphipathic helix repeat | 32 | 73 | IPR003822 | GO:0006355 | |
Tpr7g2076 | 218 | Pfam | Paired amphipathic helix repeat | 162 | 205 | IPR003822 | GO:0006355 | |
Tpr7g2076 | 218 | Gene3D | Paired amphipathic helix | 144 | 206 | IPR036600 | GO:0006355 | |
Tpr7g2076 | 218 | PANTHER | SIN3B-RELATED | 7 | 208 | IPR039774 | GO:0003714 | |
Tpr7g2076 | 218 | ProSiteProfiles | PAH domain profile. | 7 | 77 | IPR003822 | GO:0006355 | |
Tpr7g2076 | 218 | ProSiteProfiles | PAH domain profile. | 137 | 208 | IPR003822 | GO:0006355 | |
Tpr7g2076 | 218 | SUPERFAMILY | PAH2 domain | 142 | 206 | IPR036600 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g2076 | Tpr-Chr7 | 26079192 | 26090913 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g2076 | 9 | 133 | WRKY Transcription Factor Family | AT4G12020 | 32.283 | 1.96e-15 | 72.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Tpr7g2076 | PAH | 9.9e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g2076 | K11644 | - | mtr:MTR_8g062350 | 246.899 |