Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2076 ATGGCGAGTGAAGGTGGTAAGAAACTAACTGAAGATGATGCCTTAGCATTTCTTAAGGCAGTCAAGGATGTTTTCAAAGATGAAGAGGAAAATTTTAATTACTTTATGGAAATAATGATTGATTACAGAGAAAAAAGAATTTATTTCGATGATCTTATGACGAAGGTGAAGGAGTTATTTAAAGGACACGACGATCTAATTATAGGATTTAACATCTTTGCACCAAGTGATTATCAAATCCAAGTTTCACAAGAAGAAGAACAGCAACCTCAAAATAGGATTGTTGACGAATATCAAATGACAACTCCATTAGAAGAAGCAAAAGCTATTGTTGCACAATCTCCTCATATGATGCTTGGTGGAGATAATCTCAATGTGGCTCCATCAAGGAATGAACCATGTCCAATGAGAAAACTTGGTGGATACGAAGATGCTACAAAGTTTGTGAGCAAGATTAAGACTCGGTTTGAAGGAGATGGCCATGCTTACAAGTCATTTCTCAACATCATGAACATGTTGGGTGAGGGGAAAAAACCTTACACCGATACTTACCATGAGGTTGTTGCACTTTTCGAAGGTCATGCAGATCTTCTTGATGAGTTAATTCAGTTTTTTCCCGGCACTTCAAAAGTAGAAGCGTCTACTCAAAATATATGA 657 0.3683 MASEGGKKLTEDDALAFLKAVKDVFKDEEENFNYFMEIMIDYREKRIYFDDLMTKVKELFKGHDDLIIGFNIFAPSDYQIQVSQEEEQQPQNRIVDEYQMTTPLEEAKAIVAQSPHMMLGGDNLNVAPSRNEPCPMRKLGGYEDATKFVSKIKTRFEGDGHAYKSFLNIMNMLGEGKKPYTDTYHEVVALFEGHADLLDELIQFFPGTSKVEASTQNI* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2076 218 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
Tpr7g2076 218 SUPERFAMILY PAH2 domain 7 75 IPR036600 GO:0006355
Tpr7g2076 218 Pfam Paired amphipathic helix repeat 32 73 IPR003822 GO:0006355
Tpr7g2076 218 Pfam Paired amphipathic helix repeat 162 205 IPR003822 GO:0006355
Tpr7g2076 218 Gene3D Paired amphipathic helix 144 206 IPR036600 GO:0006355
Tpr7g2076 218 PANTHER SIN3B-RELATED 7 208 IPR039774 GO:0003714
Tpr7g2076 218 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
Tpr7g2076 218 ProSiteProfiles PAH domain profile. 137 208 IPR003822 GO:0006355
Tpr7g2076 218 SUPERFAMILY PAH2 domain 142 206 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2076 Tpr-Chr7 26079192 26090913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2076 9 133 WRKY Transcription Factor Family AT4G12020 32.283 1.96e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g2076 PAH 9.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2076 K11644 - mtr:MTR_8g062350 246.899