Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2072 ATGTTTAACTTGCACAATGAAGACGTTTCTAAGTTGCGATTTGGTAATTTGGAAGTTGCATACAAATTTTACTGTTGGTTTGCAAAGATGAACGGTTTTGCTGTTCGCAAAGGGCAAGATGTTAGAAATAAAGATGGAGTTCTTGTTCAAAAAACATTCGTTTGTAACCTAGAAGGCTACAGGAAAGACCGTCGCGATTTAACTGAAGTGACGCGCAAGCGTGGTCCGAAACACGAAACCAGGTGTGGTTGCAGTGCAAGACTTCGAGTGCATATTGATATAATTTCGGGTCTCTGGTACATTACTATTTTCAGTTTTGAGCACAATCATTATATGTTGACGGAGAAGCACTGTGGGCTATTGGCAGCACATAGGAAACTTACAAAATCAGATCAGATTCAAATTAAGAACTATGGTCAAGCTGGGATAAAGGTTGCTCAAATGATCGGTGCGTTTGCCAATGCTGCGGGAGGGTATGATAAGGTAGGGTTTTTGAAGAAGGATTTGCACAATCAAATTCAAAGACAAAGAAAAGAAACGTCTTCTGATGCTAAAGGTGCTGTTAAGTACCTTCTAGGTCTTAGGACTAAAGATCCATTGATGTGCCCGTTTGTTGTATTTTCCGGTGTCAACCACCATAATCAGACAATTATCTTTGCCACTGCTGCAGTTTCTAATGAGGTTGAAGGCACATATGTGTGGTTGTTGGAGCAATTTTTGCTTGCGATGAAAGGCAAGGCCCCTGTTTCTGTAATAACAGACGGTGATGTAGCTATGAGGAATGCAATAAGGAGAGTATGTCCTAATAGTTATCATAGGTTATGTGCTTGGCATCTTCTTCGAAATGCCATGTCTAACATTGGTAACCTAGAGTTCATTCCATACTTGAAAAAATGCATGCTTGGCGATAACGATGTTTGGAAATTTGAGAAACTGTGGAATGAAATGATAGATAAGTTTGGGCTTCAAGACAACAGTTGGATCAAAGAATTGTACCAGAAAAAGAAGATGTGGTCAACAGCCCATATTAGGGGGCATTTTTTTGCAGGAATACGAACGACGTCGCGGTGTGAAGCATTTCACAGTCACATGGGTCAGTTTGTCCACTCAAAGATGAATATGACTGATTTTGTGAAGCAGTTTAATAGATGTGTATGTTATTTTCGCTTCAGGGAGGTGGAGGCGGATTTTCATTCACAATATGGAAATGCTGTCTTGCAGACCCCTCTAAGGTCACTCGAGAGGTCTGCATCAAAACAATTCACACATGAGATTTTCTGCTTGGTACGTTCTGTACTAAAAAAGGTTTCCCTGATATCATTATGTGACACTCAAGAGATGGCATCCTTTTCAATTTATTCTGTGACGAAGTATCAAGACGAAGGACATGTTTGCCGTGTATCTCACAGTCCATCAAACAATGAATTTAAATGTTCTTGTCTTAGAATGGAATCAATTGGAATTCCTTGTGAACACATCGTGGCAATTATGGTATATCTTGATACTGTTGAATTCCCGACTAATCTTGTGTTGAATCGATGGTCTAAATTTGCAAAGGACTCAATTCGTGGTAATGTTAACGATGGTTCACATTACTGGGATTCACATTTGGTTGCGAGACATGCCAATTTGGTGCATCTTAGCAAGGAAGTTTCCGATTTGGCTTACAAGGATGTTGATGATTATAAAAACTATTTGGATTATCTAACCAATGAAATCACGAGGCTTAAATCGAAGTACGTTGGTGATAACGGTCCTGTGAATTTAAATGGTCCGGTCGAAGTTGATAACATATTGAACCCTTCCTGTGCAAGAAGCAAAGGCGGTGGACCCAGTTCCAACAACACTACAGCTGGGAGAAGCAGGCGTCCAGGAACATGTGGCGGATGCTCCCAAGTTGGACACAACATAAGATCTTGTCCTAACCTGGCTGAAGATGGAGAATTTCCTGCAGCCAGTTCTGTTCAATCAATGTCTGTACGGTTAAGCGGTAACAATTACGAAGGCTACGTCAACACCAGATAG 2025 0.4069 MFNLHNEDVSKLRFGNLEVAYKFYCWFAKMNGFAVRKGQDVRNKDGVLVQKTFVCNLEGYRKDRRDLTEVTRKRGPKHETRCGCSARLRVHIDIISGLWYITIFSFEHNHYMLTEKHCGLLAAHRKLTKSDQIQIKNYGQAGIKVAQMIGAFANAAGGYDKVGFLKKDLHNQIQRQRKETSSDAKGAVKYLLGLRTKDPLMCPFVVFSGVNHHNQTIIFATAAVSNEVEGTYVWLLEQFLLAMKGKAPVSVITDGDVAMRNAIRRVCPNSYHRLCAWHLLRNAMSNIGNLEFIPYLKKCMLGDNDVWKFEKLWNEMIDKFGLQDNSWIKELYQKKKMWSTAHIRGHFFAGIRTTSRCEAFHSHMGQFVHSKMNMTDFVKQFNRCVCYFRFREVEADFHSQYGNAVLQTPLRSLERSASKQFTHEIFCLVRSVLKKVSLISLCDTQEMASFSIYSVTKYQDEGHVCRVSHSPSNNEFKCSCLRMESIGIPCEHIVAIMVYLDTVEFPTNLVLNRWSKFAKDSIRGNVNDGSHYWDSHLVARHANLVHLSKEVSDLAYKDVDDYKNYLDYLTNEITRLKSKYVGDNGPVNLNGPVEVDNILNPSCARSKGGGPSSNNTTAGRSRRPGTCGGCSQVGHNIRSCPNLAEDGEFPAASSVQSMSVRLSGNNYEGYVNTR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2072 674 Pfam FAR1 DNA-binding domain 22 113 IPR004330 -
Tpr7g2072 674 ProSiteProfiles Zinc finger SWIM-type profile. 453 501 IPR007527 GO:0008270
Tpr7g2072 674 MobiDBLite consensus disorder prediction 606 622 - -
Tpr7g2072 674 MobiDBLite consensus disorder prediction 603 627 - -
Tpr7g2072 674 Pfam SWIM zinc finger 477 497 IPR007527 GO:0008270
Tpr7g2072 674 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 198 IPR031052 GO:0006355
Tpr7g2072 674 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 203 574 IPR031052 GO:0006355
Tpr7g2072 674 Pfam MULE transposase domain 202 282 IPR018289 -
Tpr7g2072 674 PANTHER OS02G0262500 PROTEIN 203 574 - -
Tpr7g2072 674 PANTHER OS02G0262500 PROTEIN 10 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2072 Tpr-Chr7 26008465 26011724 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g2072 FAR1 2.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2072 - - ccaj:109791994 565.074