Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2053 ATGGCAGGCAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTATGGGACCATCTGATCCAGACTCAGGGAAAGGAAAGAGCAATATGTCAAAGCATGTAACTCATGGCTTTCACTTGGTAAAGGGAAGATCAAATCATGCCATGGAAGACTACGTGGTTGCTGAATTCAAGCATGTTGATGACAATGAGTTGGGTTTATTTGCAATATTTGATGGTCACGCAGGTCATAGTGTACCTGATTACTTGCGGTCTCATTTGTTTGATAGTATCTTAAAAGAGCCTGATTTCTGGACTGAACCCGCGGAGAGTGTGAAGAGAGCTTATAGTGAAACTGATTCTACTATTTTAGAGAAATCAGGTGATTTGGGTAGAGGAGGTTCAACTGCAGTTACAGCAATACTCATTAATTGTCAAAAGTTAGTAGTGGCCAATATTGGAGATTCCCGTGCTGTCTTATCTGAGAATGGCGTTGCAATACCACTGTCAGTGGATCATGAACCAACAACAGAAAGCGATGATATAAAAAACAGAGGTGGTTTTGTATCTAATTTCCCAGGGGATGTTCCACGGGTTGATGGGCAATTAGCAGTGTCAAGGGCATTTGGCGACAAAAGCCTAAAGATACACATGACCTCAGAACCACATGTGACAGTGAAGGTGATAGATGATGGTGGAGAGTTTGTTATATTAGCCAGTGATGGGTTATGGAAGGTTGTGTCAAATCAAGAAGCAGTTGATACTATCAGAGATATTAAGGATGCTCGGGCAGCAGCAAAGCGTCTTACCGAAGAAGCGCTCAACAGGAAAAGCTCAGATGATATCTCTTGCATTGTTGTGAGGTTTCACTGA 849 0.4205 MAGREILHKMKEKVMGPSDPDSGKGKSNMSKHVTHGFHLVKGRSNHAMEDYVVAEFKHVDDNELGLFAIFDGHAGHSVPDYLRSHLFDSILKEPDFWTEPAESVKRAYSETDSTILEKSGDLGRGGSTAVTAILINCQKLVVANIGDSRAVLSENGVAIPLSVDHEPTTESDDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHMTSEPHVTVKVIDDGGEFVILASDGLWKVVSNQEAVDTIRDIKDARAAAKRLTEEALNRKSSDDISCIVVRFH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2053 282 Coils Coil 244 264 - -
Tpr7g2053 282 Gene3D - 28 282 IPR036457 -
Tpr7g2053 282 MobiDBLite consensus disorder prediction 8 30 - -
Tpr7g2053 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Tpr7g2053 282 SMART PP2C_4 24 279 IPR001932 -
Tpr7g2053 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Tpr7g2053 282 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Tpr7g2053 282 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Tpr7g2053 282 SMART PP2C_SIG_2 43 281 IPR001932 -
Tpr7g2053 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Tpr7g2053 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Tpr7g2053 282 CDD PP2Cc 41 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2053 Tpr-Chr7 25688940 25691913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2053 1 282 PP2C-type Phosphatase Gene Family AT3G15260 73.010 4.82e-159 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2053 K17506 - gmx:100787942 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2053 7 25688940 25691913 Tpr7g2053 7 25688940 25691913 ECH