Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2030 ATGGTGTTATCAGCTTCGTCATGTTCTCTAACGAGAAGCTCGTTGGAAGAGATGTTAGAATCGCTTCGTCGGATGGATGAGGAACAAGAGAAGAAGAAGGACTTACCTCCTGCTTTGCCATCTCGTCCGGCTTCTAAGGCCAGGCTTCCTCCTGCGAGGCGATCGTTGCCGAATAATTTTAAGGTTGGTAGATGTGTTGTGGTCGAGAATGGATTTATTGACAATGTGGAAAGTAAGAGGAAGGAGACATCACCATCACCATCACCATCAACATCAAAATGTTCTGAATATAAGAGAAGTGACAGCAGTTTTGGGAGGAAGAGGGTGAAGAAGGATGTTGTGGAGTCACCTTATGTGTCAGCAATTTCAGAATTGGATGGTGACACTATTTCTTATTTCATCAAAATGAAGCTTCGCGTTTGGTGTAGGCAACCAAGAGGGCAATGGGAGCTAGGTTCAATACAATCAACTTCGGGAGAAGAAGCTTCCATTTCACTATCAAATGGAAAAGTACTGAAAATGGCTAGATCAGAACTCGTACCAGCTAATCCTGATATTTTAGAGGGTGCGGATGACCTTATCAAAATCGCTTATTTGAATGAGCCATCTGTTCTTCACAATCTTAGGTTTAGATATTCTCGGGAGATGATATATAGTAAAGCAGGTCCGGTTTTAATTGCACTCAATCCTTTCAAAGATCTCCAGATTTATGGAAATGATTATGTCTCCACTTATAGGCAGCAATTTGTTGATACTCCTCATGTTTATGGTATGGTAGATGCAGCTTATAACCAGATGATGAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGAAAGACAGAGACAGCTAAAATTGCTATGCAATACTTAGCTGCTCTTGGTAGTAGCAGTTGTGGGAGAGCAAATGATGTTCTTCAGACAAATTGCATACTAGAAGCTTTTGGAAATGCAAAAACGTCTGTAAATGACAACTCTAGCAGATTTGGAAAGTTTATTCAAATTCATTTCAGTGCCATGGGTAAAATATGCGGGGCTAAAATTCAAACCTATTTGTTGGAAAAGTCGAGAGTTGTTCAAATGGCCAATGGCGAGAGGTTGTATCACGTATTTTATCAACTTTGTGCTGGATCTTCATCTAGTCTTAAAGAGAGACTGAATCTTAGGGCAGCCCGTGAATATAAATATTTAAATCAAAGTGACTGCATGACAGTTGATGGTATTGATGATGCTAAAAACTTTCATCAACTGAAGAAAGCATTTGATGCTGTTCGAATTTGTAAAGAGGACCAAGACCTCATCTTTAAGATGCTTGCTGCAATACTATGGCTGGGAAATATATCATTCAAAGTTATTGACAGTGGAAATCACATTGAAGTTATGAGTGATGAAGCTGTATCCAGTGCTGCCATGCTGATGGGTTGCAGTTCCCAGGAATTAATAATGGCATTATCTACCCATAAAATCCAACCTGGCGAGGACACTGTTGCCACAAGTTTGACATTATTGCAGGCAATTGAAACAAGAGATGCAATTGCCAAATTTATTTATGCAAGCTTGTTTGAATGGCTTGTACAACAAGTTAACAAGTCACTTGAAGTGGGTGAAAAATATACAGAGAAATTCATTAGTATCCTTGATTTTTATGGGTTTCAGTCATTCCAGAAAAACAACTTTGAACAGTTTTGCATAAATTATGCCAATGAGAGGCTTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTGTGAATCGGACGGCATTGTTTGTACAGAGTTAGATTTTGAGGACAATCAAGAGTGCTTGGATTTATTTGAGAAGAAACCTCTCAGTCTATTCTCATTGTTGGATGAGGAATCAAATCTCACCGAGGCTTCTGATTTAACATTTTCTAATAAACTAAAGAATCTCCTGGATGCTAATCATTGCTTCAAAGTGGAAAGAGGTGGAGCTTTCAGTGTTCGTCATTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTATAGAAAAGAACAGAGATATGTTGTCTTCTAATTCCATTCAACTCATTTCATCATGTAATTGTGAACTGCTGAATTTGTTCTCCGAAGTGTTTAACCAATCTGAGGAGCATGGAAATTCCACTTTCCATTTTGATGCATTATACTCACAGAAGAGAGGTGTCGGAACAAACTTCAAGGATCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCAGCACTCCTCACTTTATTCGCTGTATAAAACCAAATACTAGGAAGCATCCTGGAATTTATGACAATGAACTTGTCCTTCAACAGCTCAGATCTTGTGGAGTTCTAGACGCTGTTAGAATTTCAAGGGCTGGATATCCTACTCGAATGAACCATCAAGAGTTTTCCAGACGGTACGAGTTTCTGCTTTTTGGGACTGATGTACCCCGGGATCCGTTGAGCACCTCAGTCGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTACACGAAACTGTATCTCCGAGCAGGGCAGATCGGTGCCTTGGAGGATAAGAGAAAACAGTTTTTGCAGGGAACTCTTCGGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGTAGTTATTTCTGTGAATTTAAGAATGGAGCGACAATATTACAATCATTTATTCGTGGAGAAACTACAAGAAAGAAACATGGTCTTTTGACGAAATCTTCCATATCCATTTATTCTAAAAAACTTGAGGAGATTCATGCAATCATATTACTTCAATCTGTGATTCGTGGGTGGCTGGTTCGTAGGGACTCTAGTTGCGACAATATATTGAAGAAAAATCATGATAATGCAAAACCTAGACCGAAGTCTCATGTTAAGGATTTGTCCAAAGAGCTGGTTGAGAACATGCCTTCAGCTTTAGCAGAACTCCAGAAACGGGTATACAGCGCTGAAGCAATTGTCAAGCAAAAGGAAGAGGAAAATACTGAATTGAGGGAAAAGTTAAAACAATCTGAAAGAAAGAGGGTTGAATATGAAGCGAAGATGAAGTCAATGGAGGAGGCATGGCAAAAGCAGATGGCATCTTTGCAAACGAGTCTTGTTGCTGCTAGAAAGAACCATGCTTCAGAGAATGGCACTGTTCAACCTGTAAGACATGATCTTGTGTCACCTCGCTACTATGATTCTGAACATGCTACTTCCATGGAATCTCGAACAACTGATGGGAGCACACCTATGAAGCTTTCTAGTTGTTTTTCGGTCGCTGATGCAGGGAGGCAGACTAATGGTGCTTTGACTACAGTGAGCAATCTGATGAAGGAATTTGAGCAGCGAAGACAGACCTTCAATGATGAAGTTAAAGCTTTGAATGAGGTTAAACCAGGGCAGTCTTCCAACACAAATTCTGCTGATGAACTTCGGAAACTTAAGCAAAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGATTACGGGAGACAAAAGCAAGGCTTTCTGAAACCGAAAAAAGTCGATGGACATGGTGGGGGAAATTAAGCTTGAAAGCATAA 3561 0.3985 MVLSASSCSLTRSSLEEMLESLRRMDEEQEKKKDLPPALPSRPASKARLPPARRSLPNNFKVGRCVVVENGFIDNVESKRKETSPSPSPSTSKCSEYKRSDSSFGRKRVKKDVVESPYVSAISELDGDTISYFIKMKLRVWCRQPRGQWELGSIQSTSGEEASISLSNGKVLKMARSELVPANPDILEGADDLIKIAYLNEPSVLHNLRFRYSREMIYSKAGPVLIALNPFKDLQIYGNDYVSTYRQQFVDTPHVYGMVDAAYNQMMRDEVNQSIIISGESGSGKTETAKIAMQYLAALGSSSCGRANDVLQTNCILEAFGNAKTSVNDNSSRFGKFIQIHFSAMGKICGAKIQTYLLEKSRVVQMANGERLYHVFYQLCAGSSSSLKERLNLRAAREYKYLNQSDCMTVDGIDDAKNFHQLKKAFDAVRICKEDQDLIFKMLAAILWLGNISFKVIDSGNHIEVMSDEAVSSAAMLMGCSSQELIMALSTHKIQPGEDTVATSLTLLQAIETRDAIAKFIYASLFEWLVQQVNKSLEVGEKYTEKFISILDFYGFQSFQKNNFEQFCINYANERLQQHFNRHLFKLEQEDCESDGIVCTELDFEDNQECLDLFEKKPLSLFSLLDEESNLTEASDLTFSNKLKNLLDANHCFKVERGGAFSVRHYAGEVLYDTNGFIEKNRDMLSSNSIQLISSCNCELLNLFSEVFNQSEEHGNSTFHFDALYSQKRGVGTNFKDQLFKLMHQLESSTPHFIRCIKPNTRKHPGIYDNELVLQQLRSCGVLDAVRISRAGYPTRMNHQEFSRRYEFLLFGTDVPRDPLSTSVAVLQKFNIPSEMYQVGYTKLYLRAGQIGALEDKRKQFLQGTLRIQKCFRGHQARSYFCEFKNGATILQSFIRGETTRKKHGLLTKSSISIYSKKLEEIHAIILLQSVIRGWLVRRDSSCDNILKKNHDNAKPRPKSHVKDLSKELVENMPSALAELQKRVYSAEAIVKQKEEENTELREKLKQSERKRVEYEAKMKSMEEAWQKQMASLQTSLVAARKNHASENGTVQPVRHDLVSPRYYDSEHATSMESRTTDGSTPMKLSSCFSVADAGRQTNGALTTVSNLMKEFEQRRQTFNDEVKALNEVKPGQSSNTNSADELRKLKQRFEGWKKQYKVRLRETKARLSETEKSRWTWWGKLSLKA* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2030 1186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 885 IPR027417 -
Tpr7g2030 1186 MobiDBLite consensus disorder prediction 19 37 - -
Tpr7g2030 1186 ProSiteProfiles IQ motif profile. 921 950 IPR000048 GO:0005515
Tpr7g2030 1186 Pfam Myosin head (motor domain) 191 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 Gene3D - 371 427 - -
Tpr7g2030 1186 Gene3D - 559 749 - -
Tpr7g2030 1186 Gene3D - 793 860 - -
Tpr7g2030 1186 ProSiteProfiles Myosin motor domain profile. 188 859 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 MobiDBLite consensus disorder prediction 78 101 - -
Tpr7g2030 1186 Coils Coil 1109 1129 - -
Tpr7g2030 1186 Coils Coil 12 35 - -
Tpr7g2030 1186 Coils Coil 977 1025 - -
Tpr7g2030 1186 PANTHER MYOSIN 117 1185 - -
Tpr7g2030 1186 PRINTS Myosin heavy chain signature 218 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 PRINTS Myosin heavy chain signature 272 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 PRINTS Myosin heavy chain signature 315 342 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 PRINTS Myosin heavy chain signature 547 575 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 PRINTS Myosin heavy chain signature 600 628 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 ProSiteProfiles IQ motif profile. 863 889 IPR000048 GO:0005515
Tpr7g2030 1186 Gene3D - 863 911 - -
Tpr7g2030 1186 SMART iq_5 920 942 IPR000048 GO:0005515
Tpr7g2030 1186 SMART iq_5 860 882 IPR000048 GO:0005515
Tpr7g2030 1186 SMART iq_5 883 905 IPR000048 GO:0005515
Tpr7g2030 1186 Gene3D Kinesin motor domain 187 792 IPR036961 -
Tpr7g2030 1186 Coils Coil 1154 1174 - -
Tpr7g2030 1186 CDD MYSc_Myo8 202 847 IPR036022 -
Tpr7g2030 1186 MobiDBLite consensus disorder prediction 82 98 - -
Tpr7g2030 1186 MobiDBLite consensus disorder prediction 19 53 - -
Tpr7g2030 1186 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 135 184 IPR004009 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 SMART MYSc_2a 182 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr7g2030 1186 Gene3D Myosin VI head, motor domain, U50 subdomain 428 536 - -
Tpr7g2030 1186 Pfam IQ calmodulin-binding motif 923 939 IPR000048 GO:0005515
Tpr7g2030 1186 Pfam IQ calmodulin-binding motif 866 881 IPR000048 GO:0005515
Tpr7g2030 1186 Pfam IQ calmodulin-binding motif 887 904 IPR000048 GO:0005515
Tpr7g2030 1186 PANTHER MYOSIN-2 ISOFORM X1 117 1185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2030 Tpr-Chr7 25207134 25228028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2030 1 1181 Myosins gene family AT5G54280 55.393 0.0 1327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2030 K10357 - gmx:100802074 1643.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2030 7 25207134 25228028 Tpr7g2030 7 25207134 25228028 ECH