Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2026 ATGGCCACCACAACAACTGAACAACACACCTCACGTGCTTCACACATGCACGACACCACCACAGACAACGAAGACGACACAATTACCGACAGTGAGCTGGAGACTCACACCGATGAGGAAGACGATGAAGAAGAAGAAGAACAGAAACCTGTGAACTATAGAAGCTCAATAACTTCTGCAGGTATTAGTAGAATTGTGGATCCAAGAGCAAAATGGGTGCAAGAATGGAACAGAGTCTTCTTACTAGTATGTGCAGCAGGGTTGTTTGTAGACCCACTGTTCTTCTATGCTCTTAATATCAGTGACTCATTTATGTGTCTCTTCATCGACGGTTGGTTCGCCGTCACAGTTACGGTGCTCCGTTGCATGACTGATGCTTTGCACCTTTGGAATATGTTCCTCCGTTTTAAGACGGCCAAACGCAGCTCATTAACATTCGCCACCAGTTCGGCCACCGCAGATGCTGGCTGTTCCGTCGCTCTTGGTTATCTTAAGTCCCGCCGGGGATTTTTCTTTGACCTCTTCGTTATTCTTCCAATACCTCAGATTGTGCTTTGGGTAGGAATTCCTTCTTTGTTGGAGCAAGGTTCAGTTACTTTGGTGATGACAATATTATTGATTGTATTTCTCTTTCAATACCTTCCCAAAATTTACCACTCTGTATGCCATCTACGACGCACACAAAACCTCTCTGGCTATATTTTTGGAACTGTTTGGTGGGGAATTGCCCTTAACATGATCGCGTATTTTGTTGCTTCCCATGCTGCAGGGGCATGTTGGTACTTGTTGGGGATCCAAAGAGCAGCCAAATGTCTCAAAGAGCAATGTTTGAAAACAAATGGTTGTGGCAATCAAATATTGTCTTGTCATAAGCCAATATATTATGGAAGTACAAGTTTATTGAATAGGGATATAGCAAGATTGGCATGGGCAAAGAACAGGGAAGCAAGGTCTACATGCTTAAATGGTCCTGATAACTTCAATTATGGTGCTTATAGATGGACTGTTCAACTTGTCACTAATGATAATCGACTAGAAAAAGTACTTTTCCCAATTTTTTGGGGACTAATGACTCTCAGCACTTTCGGAAACCTTGAGAGCACGACGGATTGGCTAGAAGTAGTTTTCAACATCATAGTCTTAACGAGTGGCCTTCTTCTCGTCACTATGTTGATTGGAAACATCAAGGTGTTTTTGCATGCAACAACATCAAAGAAGCAAGTGATGCAATTGAAAATGAGGAATGTTGAATGGTGGATGAGAAAAAAACATTTGCCACAAGGGTTTCGACAACGTGTGCGTAACTATGAAAGACAACGTTGGGCTGCTATGCGTGGTGTTGATGAATGTGAGATGACCAAAAATCTTCCTGAAGGTCTAAGAAGAGACATTAAATACCATCTATGTTTGGATTTGGTGAGACAGGTGCCATTGTTTCAACATATGGATGAACTTGTTCTAGAGAACATATGTGACCGAGTGAAATCTCTTATATTCACCAAGGGAGAAACAATAGCTAGAGAAGGAGACCCAGTTCAAAGAATGCTATTTGTAGTGAGGGGTCATCTTCAAAGCAGCCAAGTTCTAAGAGATGGGTTGAAAAGTTATTGCATGTTAGGACCAGGAAATTTCACTGGGGATGAGCTCCTTTCATGGTGTTTGAGGAGACCCTTTATAGAGAGACTTCCATTGTCAACATCAACACTTGTCACACTTGAAACAACAGAGGCTTTTGGTCTTGAAGCTGAGGATGTCAAGTACGTGACACAACATTTCAGGTACACATTTGTGAAGGAAAAGGTGAAGAGAAGTGCTAGGTATTACTCACCAGGGTGGAGAACTTGGGGTGCTGTGGCAATTCAATTGGCATGGAGAAGATACAGGCATAGATTGACTTTGAACTCATTGTCATTTATAAGACCTAGGAGACCCTTGTCAAGATGTTCTTCATTGGGAGAGGATAGGCTTCGACTCTACACAGCTTTGTTAACTTCACCAAAGCCTAATCAAGATGATTTTGACTTTTGA 2028 0.4211 MATTTTEQHTSRASHMHDTTTDNEDDTITDSELETHTDEEDDEEEEEQKPVNYRSSITSAGISRIVDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALNISDSFMCLFIDGWFAVTVTVLRCMTDALHLWNMFLRFKTAKRSSLTFATSSATADAGCSVALGYLKSRRGFFFDLFVILPIPQIVLWVGIPSLLEQGSVTLVMTILLIVFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCLKTNGCGNQILSCHKPIYYGSTSLLNRDIARLAWAKNREARSTCLNGPDNFNYGAYRWTVQLVTNDNRLEKVLFPIFWGLMTLSTFGNLESTTDWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQVMQLKMRNVEWWMRKKHLPQGFRQRVRNYERQRWAAMRGVDECEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGLKSYCMLGPGNFTGDELLSWCLRRPFIERLPLSTSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWGAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDDFDF* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2026 675 Gene3D Helix hairpin bin 403 469 - -
Tpr7g2026 675 Gene3D Jelly Rolls 476 594 IPR014710 -
Tpr7g2026 675 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 9 672 - -
Tpr7g2026 675 SUPERFAMILY Voltage-gated potassium channels 68 399 - -
Tpr7g2026 675 MobiDBLite consensus disorder prediction 1 53 - -
Tpr7g2026 675 ProSiteProfiles cAMP/cGMP binding motif profile. 478 557 IPR000595 -
Tpr7g2026 675 SUPERFAMILY cAMP-binding domain-like 404 592 IPR018490 -
Tpr7g2026 675 CDD CAP_ED 478 584 IPR000595 -
Tpr7g2026 675 MobiDBLite consensus disorder prediction 25 47 - -
Tpr7g2026 675 Pfam Ion transport protein 76 395 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr7g2026 675 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 672 - -
Tpr7g2026 675 Pfam Cyclic nucleotide-binding domain 499 586 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2026 Tpr-Chr7 25089894 25101955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2026 62 674 Ion Channels AT5G54250 77.868 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2026 K05391 - gmx:100783341 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2026 7 25089894 25101955 Tpr7g2026 7 25089894 25101955 ECH