Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2022 ATGTTTAATGAATCATTGGTTGTCCAAGAAAGTTTACTTTGTGAGATTTTGTGGAGGTTGTTCTCCGGTGCTTTGTGCATTTGGCGTGGATTTGCGGAGGCGTTATCTTTGTATGATGCAGCTATTGCAATTGATCCTAAAAAGGCTGCTTATAGAAGTAACAGAAGTGCTGCTTTAACTGCTCTTGGTAGGCTTCTTGAAGCTTTGTTTGAATGTAGGGAAGCTATTCAAATTGATCCTCATTATCATCGATCTCATCATCGTTTAGGAAGTTTGCATTTTAGATTAGGAGAAACAGATAAGGCCCTTTATCATTATAAACAAGCAGGGCCAGAGGCTGATCCTGATGAAGTTGCTAAAGTGAAGATTCTTCAAGCTCATTTAAATAAGTGCACCGAGGCTCAAAGGGTAGGAGATTGGAACAAACTTGTGGTCGAGACCTCCAACACTATATCAGCTGGTGCAGATTCTGCTCCACAGGAAAATGTCAAAATCAAGCACCCTCAATTGTTGACGAACAAAGGTTTCACAACTCAAAGGCAAAATAGGCATTGGGACTACTATCAAGAATTTGAAGTTTTTCATTGGCAAAGGATAAATACAAAACGATGGGAGTTGGACTATTTGGAAGGCTAA 636 0.3978 MFNESLVVQESLLCEILWRLFSGALCIWRGFAEALSLYDAAIAIDPKKAAYRSNRSAALTALGRLLEALFECREAIQIDPHYHRSHHRLGSLHFRLGETDKALYHYKQAGPEADPDEVAKVKILQAHLNKCTEAQRVGDWNKLVVETSNTISAGADSAPQENVKIKHPQLLTNKGFTTQRQNRHWDYYQEFEVFHWQRINTKRWELDYLEG* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2022 211 Pfam Tetratricopeptide repeat 85 115 IPR019734 GO:0005515
Tpr7g2022 211 Gene3D Tetratricopeptide repeat domain 29 194 IPR011990 GO:0005515
Tpr7g2022 211 SUPERFAMILY TPR-like 25 115 IPR011990 GO:0005515
Tpr7g2022 211 SMART tpr_5 83 116 IPR019734 GO:0005515
Tpr7g2022 211 SMART tpr_5 49 82 IPR019734 GO:0005515
Tpr7g2022 211 PANTHER OS01G0616333 PROTEIN 31 160 - -
Tpr7g2022 211 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 31 160 IPR044534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2022 Tpr-Chr7 25045053 25048431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2022 31 109 Glycosyltransferase AT3G04240 31.646 4.61e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2022 - - lang:109326248 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2022 7 25045053 25048431 Tpr7g2022 7 25045053 25048431 ECH
Tpr7g3460 7 42897683 42901830 Tpr7g2022 7 25045053 25048431 PCT
Tpr7g2022 7 25045053 25048431 Tpr7g4317 7 51945254 51948709 PCT