Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2002 ATGGAGATTAAAAACCAACTCCAAGTTTCCAATGCAGGGAAACAAATTGCAGGAACCAATTTTTTCAAAACTTGTTTCAATGTACTAAATGCCTTGACAGGTATTGGGATACTATCAATGCCATATGCAATTTATCAAGGAGGGTGGTTTAGTATTATGCTGCTAATTATTTTTGGGATGATATGTTGCTACACAGCTTTACTATTGGAAAGGTGTATGAATGCACATCCAGGAATCAAATCTTATGCTGATATAGGTGAGGTTGCTTTTGGGTACAAAGGAAGAGCTATAATAGCTATTTTCATATACATTGAGTTGTTTTTAGTTGCCGTGGAGCTTCTTATATTAGAAGGAGACAATTTGGAGAAACTTTTCCCAAATATGAGATTCACAATATTTGGGTTTAGAATTGGTGGTAAAAGTTGTTTTGTGATTCTCACTGCTTTGGCAATACTACCAACAACATGGTTGAGAAACTATGGAGCTCTAGCCTATATTTCAATTGGTGGAGTATTTACTTCAATTATATTAATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGCTTTCATGAAAGAGGCCATTTGATACATTGGGATGGACTATCTACTTCTATGAGCATTTTTGCATTTTGTTACAATGCTCATGCATTAATGCCCACAATTCTCAATTCCATGAGTGACAGAAAACAATTTCCCAAGGTTGTGTTGATTTGCTTTGTGGTAAGCGTTGTTATCTATGGAACTATTGCCGTTTTAGGCTACACAATGTTTGGAGATCATTTGAAGTCACAAATAACATTAAACTTACCCACAAAAACAATAAGTACTAAAATAGCAATCTATTCCACAATAATTAATCCTTTCACTAAGTATGCTATTATAATCAGCCCAATAACAATTGCTATCGAGGACAAGTGGAATTTATGCAAGAGTAGAGCTATTAGCATTTTAGTTAGAACAATCATTGTGGCTAGTAGTGTACTTGTGGCACTATACATTCCCTTTTTTGCATACCTTATGGCGTTTATTGGTGCATTCTTGAGTGTAGCAATGTCATTGTTGTTTCCTTGCCTTTGCTACCTAAAGATAAACAAAGCTACCAAGAGTTTTGGGTTAGAGCTGATCATCATCATGGGAATTCTTCTCGTTGGTATACTTATGGGAATATGTGGTACCTATATTTCAGTCGGGCAAATTTTAAATGTAATGAAACATTGA 1227 0.3545 MEIKNQLQVSNAGKQIAGTNFFKTCFNVLNALTGIGILSMPYAIYQGGWFSIMLLIIFGMICCYTALLLERCMNAHPGIKSYADIGEVAFGYKGRAIIAIFIYIELFLVAVELLILEGDNLEKLFPNMRFTIFGFRIGGKSCFVILTALAILPTTWLRNYGALAYISIGGVFTSIILIGCVVWVGEVDGVGFHERGHLIHWDGLSTSMSIFAFCYNAHALMPTILNSMSDRKQFPKVVLICFVVSVVIYGTIAVLGYTMFGDHLKSQITLNLPTKTISTKIAIYSTIINPFTKYAIIISPITIAIEDKWNLCKSRAISILVRTIIVASSVLVALYIPFFAYLMAFIGAFLSVAMSLLFPCLCYLKINKATKSFGLELIIIMGILLVGILMGICGTYISVGQILNVMKH* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2002 408 Pfam Transmembrane amino acid transporter protein 19 397 IPR013057 -
Tpr7g2002 408 PANTHER OS05G0424000 PROTEIN-RELATED 15 404 - -
Tpr7g2002 408 PANTHER OS06G0228500 PROTEIN 15 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2002 Tpr-Chr7 24560814 24563028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2002 1 403 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.946 4.19e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2002 K15015 - gmx:100812006 563.918