Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2000 ATGAGGAAGTATAATTTACCAAATGAAAGGAAAAAAGTTTGGCTTGATGCACTGTTGAAAGAGAACTTTGGTAATTGCAAGAACCATCAAGAAAAGAACAATGAGAAGAATGTGTTTTGTGTAGATTGTAGAATGAGTTTGTGTAAACATGGTATAGAATCTCATTTTCTTCATAAAAGGTTTCAAATTTACCAATATAGTTATCAAGATGTTGTCAAATATTCTGACATACTCAAGTATTTTGATTGCTCAAATATTCAGACATATAAATCAAACAAAGACACGGTTGTGCATCTCAAACCTCGACCATCCAAAGAAAAGAAACTAGCAATAGAACCTAAAGTTGCTAGTTTAAGCCATGGACCTCAAGTCAAGGAAACAAAAACATCAACACCTCATAATAAGTTTGGTGGAATTTGTGAAGAATGTGGCAAACATTTGCAAGACAAGCGTAACCGATTTTGTTCCCTTACATGCAAGATGTCAATAATTGAGAAGCTTGGATTGTCCATTTTATTCTTTGAGGAGCTTGGAGATCAAAATGACCATAACCAAAATTCAGAGGCCGAGTCATCTATCTCTATTGCAGAACCATATAGATATGTTGAAAAAGTGAATTTCAGAAAGCATCCAAGGAAAAATACACCTATGAGATCTTTCTATCTTTGA 669 0.3378 MRKYNLPNERKKVWLDALLKENFGNCKNHQEKNNEKNVFCVDCRMSLCKHGIESHFLHKRFQIYQYSYQDVVKYSDILKYFDCSNIQTYKSNKDTVVHLKPRPSKEKKLAIEPKVASLSHGPQVKETKTSTPHNKFGGICEECGKHLQDKRNRFCSLTCKMSIIEKLGLSILFFEELGDQNDHNQNSEAESSISIAEPYRYVEKVNFRKHPRKNTPMRSFYL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2000 222 Pfam PLATZ transcription factor 65 161 IPR006734 -
Tpr7g2000 222 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 203 - -
Tpr7g2000 222 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2000 Tpr-Chr7 24526404 24527640 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr7g2000 PLATZ 3.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2000 - - gmx:100820425 231.106