Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1999 ATGCTACCGACTCAACATCTTCAGTTCTGTTTAGATTCAAATAAAATGATTTATAGGATCATTTTGTTAATTTTTGCTTCCTACATGATAACAAGCACTTCACTGGACACTTTATCTCAGAATCAATCTATTCTTGATGGCCAGAGTTTGATTTCAGCAAAAGGAACTTTTGAACTCGGTTTCTTCAGTCCAGGTAATTCAAAAGGAAGATATTTAGGTATGTGGTACAAAAATTTAACCCCTTTAACAATTGTTTGGGTGGCCAACAGAGAAACACCACTGTACAATAATTTAGGTATTTTTAAACTCAATGAAAATGGGGTTCTTGTGATTCTAAACGGCACAAAAAACACAATTTGGTCCTCGAATGTGTCAAACAAACCCGCGAATAAGTCAATAACTGCACATCTATTGGACACAGGAAATATTGTGTTGAAAATTGGGCAGGACAATGTTTTGTGGCAGAGTTTTGATTATCCATGTGATACATTATTGCCGGGAATGAAGCTTGGATGGAACTTAGTAACCGGTCTAAACATGTTCGAATCGTCTTGGAAAAGTTTAGATGATCCAGCTAAGGGAGATTATTCTGTAAATGTTGATATCAGAGGATATCCGCAACTAGTTATTAAGATGGGATCTGTCATAAGATTGAGAGTAGGATCATGGAATGGACGCGCTTTTACCGGATATCCAACACAACCATTGAAACAAAAGCAAAGATTTGAATTTGTCATGACTGAAAAAGAAGTGTATCATCGGTATGAAGTTGTTGATAGCTCTGTTGTTTCTATATATAAACTCTCCCCTTTAGGAAATTTGCAGGCTTTAGTTTGGACAAGTAAAACAAGCAATAGGATAGTAGTCGACACTGGCATGCAAGATTCTTGTGATAGCTATGCAACATGTGGTTCTAATTCTGTATGCAATATGAACGGAAACGTTCCCAGATGTGAATGCCTAAAAGGTTATGTTCCTAAGTTTCCTGAACAATGGAATATTTCATATTGGTCTAGTGGTTGTGTTCCGAAAATTAACTCCGTTTGTGGGAACAATAAGACAAGTGGTTTCCTGAAATACCGAGAAATGAAATTGCCAGACACGTCTTCATCATGGTATAATAAAACGATGAATCTTGTGGAATGTCAAAAAGTGTGTATGAAAAATTGTTCATGTGCGGCTTATACAAATGTGGATATCCGAAATGGGGGAAGTGGTTGTTTGCTTTGGTTTGGTGATCTAGTTGACATGAGAGTATTTTCTCAATGGGGACAAGATCTTTATATCAGAGTCCCTTCTTCAGAATTGGATCATGTTAGTGTTGATGGCAACAGAAACCAAAAGAAGCGACTGATACGGATCACAGTTGCCGTGATAATTTCTGGATTCCTAATATGTGCCTGCATAATAGTATTTATAAAGCGAGTGGCACCGAGATTATATCATCTTGCGCCATTTCAATGGAGACAACAATATTTAAGATTGAGGAAGGAAGATTCAGATCTGCCAATATTTGATTTTTCAATCATTGTTAAGGCAACTGATAGTTTTGCTAGCAGAAATAAACTTGGGGAAGGTGGATTTGGACCTGTTTATAAGGGTACCCTGATAGATGGAAAAGAGGTAGCCATAAAGCGCAATGCAAAGATGTCTGATCAAGGGTCGGAGGAATTTAAAAACGAAGTTTTGTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTATTGGTTGTTGTATTCATAGAGAGGAAAAATTGTTGATCTACGAATACATGCCCAACAGGAGCTTAGACTACTTCATCTTTGATGAAACTAGAAGCAAACTCTTGGCGTGGTCAAAGCGTTCCGATATTATTGCTGGCATTGCTAGAGGACTTCTTTATCTCCACCAAGATTCTAGACTTAGAATTATTCACAGAGATTTGAAGTTAAGCAATATCTTGCTAGATGCACATATGAATCCAAAAATCTCGGATTTTGGTTTGGCTCGGACATTTTGTGGCGATCAAGTTGAAGCCAGAACAAGAAAGTTGGTTGGAACATATGGCTACATGCCTCCAGAGTATGCTATGCATGGTCGTTACTCCATGAAATCAGATGTGTTTAGTTTTGGAGTAATAGTATTGGAGATAATTAGCGGAAAAAAGGTTAAGGCGTTTTATGACTCAGAACACTCACTCAACCTTCTTGGACATGCATGGAGACTGTGGATTGAAAACATGGCACTGGAACTAGTTGATCCACACTTTGTTGAGACAATCGTTTATTCTGAAATATTAAGATATATGCATGTGGGATTGTTATGCGTACAACAAAAACCAGGAGATCGACCAGACATGTCATCTGTAATTCTTATGCTGAATGGTGAGAAATTATTGTCTCAGCCGAAAGCTCCGGGATTTTATACCGGAAGGGGCTTAACTGAACCAATATCACCATCTTCAAATCAGATGTCAATTACAATTTTTGAGGCAAGATAG 2484 0.3768 MLPTQHLQFCLDSNKMIYRIILLIFASYMITSTSLDTLSQNQSILDGQSLISAKGTFELGFFSPGNSKGRYLGMWYKNLTPLTIVWVANRETPLYNNLGIFKLNENGVLVILNGTKNTIWSSNVSNKPANKSITAHLLDTGNIVLKIGQDNVLWQSFDYPCDTLLPGMKLGWNLVTGLNMFESSWKSLDDPAKGDYSVNVDIRGYPQLVIKMGSVIRLRVGSWNGRAFTGYPTQPLKQKQRFEFVMTEKEVYHRYEVVDSSVVSIYKLSPLGNLQALVWTSKTSNRIVVDTGMQDSCDSYATCGSNSVCNMNGNVPRCECLKGYVPKFPEQWNISYWSSGCVPKINSVCGNNKTSGFLKYREMKLPDTSSSWYNKTMNLVECQKVCMKNCSCAAYTNVDIRNGGSGCLLWFGDLVDMRVFSQWGQDLYIRVPSSELDHVSVDGNRNQKKRLIRITVAVIISGFLICACIIVFIKRVAPRLYHLAPFQWRQQYLRLRKEDSDLPIFDFSIIVKATDSFASRNKLGEGGFGPVYKGTLIDGKEVAIKRNAKMSDQGSEEFKNEVLLIAKLQHRNLVKLIGCCIHREEKLLIYEYMPNRSLDYFIFDETRSKLLAWSKRSDIIAGIARGLLYLHQDSRLRIIHRDLKLSNILLDAHMNPKISDFGLARTFCGDQVEARTRKLVGTYGYMPPEYAMHGRYSMKSDVFSFGVIVLEIISGKKVKAFYDSEHSLNLLGHAWRLWIENMALELVDPHFVETIVYSEILRYMHVGLLCVQQKPGDRPDMSSVILMLNGEKLLSQPKAPGFYTGRGLTEPISPSSNQMSITIFEAR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1999 827 Gene3D - 29 157 IPR036426 -
Tpr7g1999 827 PIRSF SRK 10 827 IPR024171 GO:0004674
Tpr7g1999 827 Gene3D Transferase(Phosphotransferase) domain 1 593 798 - -
Tpr7g1999 827 Pfam Protein tyrosine and serine/threonine kinase 520 731 IPR001245 GO:0004672|GO:0006468
Tpr7g1999 827 ProSiteProfiles Bulb-type lectin domain profile. 35 158 IPR001480 -
Tpr7g1999 827 CDD B_lectin 41 160 IPR001480 -
Tpr7g1999 827 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 25 825 - -
Tpr7g1999 827 Gene3D Phosphorylase Kinase; domain 1 491 592 - -
Tpr7g1999 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 191 IPR036426 -
Tpr7g1999 827 SMART ntp_6 352 431 IPR003609 -
Tpr7g1999 827 CDD PAN_AP_plant 349 432 - -
Tpr7g1999 827 SUPERFAMILY Protein kinase-like (PK-like) 500 792 IPR011009 -
Tpr7g1999 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 825 - -
Tpr7g1999 827 ProSiteProfiles PAN/Apple domain profile. 349 432 IPR003609 -
Tpr7g1999 827 CDD STKc_IRAK 523 790 - -
Tpr7g1999 827 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Tpr7g1999 827 Pfam PAN-like domain 349 417 IPR003609 -
Tpr7g1999 827 SMART blect_4 41 160 IPR001480 -
Tpr7g1999 827 ProSiteProfiles EGF-like domain profile. 293 330 IPR000742 -
Tpr7g1999 827 Pfam D-mannose binding lectin 83 186 IPR001480 -
Tpr7g1999 827 ProSiteProfiles Protein kinase domain profile. 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1999 827 SMART serkin_6 517 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1999 827 Gene3D Hepatocyte Growth Factor 349 427 - -
Tpr7g1999 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1999 Tpr-Chr7 24516214 24520403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1999 505 827 Receptor kinase-like Gene Family AT4G11530 56.083 1.28e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1999 PK_Tyr_Ser-Thr 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1999 - - mtr:MTR_8g465570 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1999 7 24516214 24520403 Tpr7g1999 7 24516214 24520403 ECH
Tpr7g1999 7 24516214 24520403 Tpr7g3625 7 44971503 44976246 PCT