Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1998 ATGTCTGATCAAGGGTCGGAGGAATTTAAAAACGAAGTTTTGTTGATTGCAAAACTTCAACATGGTAATCTTGTGAAGCTTCTTGGTTGTTGTATTCATAGAGAGGAAACATTGTTGATCTACGAATACTTGCCCAACAGGAGCTTAGACTACTTCATCTTTGATGAAACTAGAAGCAAACTCTTGGCGTGGTCAAAGCGTTCCGATATTATTGCTGGCATTGCTAGAGGACTTCTTTATCTCCACCAAGATTCTAGACTTAGAATTATTCACAGAGATTTGAAGTTAAGCAATATCTTGCTAGATGCCCATATGAATCCAAAAATCTCAGATTTTGGTCTGGCTCGGGAATTTTGCGGCGATCAAGTTGAAGCCAGAACAAGAAAATTGGTTGGAACATATGGCTACATGCCTCTAGAGTATGCTATGCATGGCCGTTACTCCATGAAATCAGATGTATTTAGTTTTGGAGTAATAGTATTGGAGATAATTAGCGGAAAAAAGTTTAAGGTGTTTTATTACTCAGAACACTCACTCAACCTTCTTGGACATGCATGGAGACTGTGGATTGAAAACATGGTACTGGAACTAGTTGATCCACATGTAATTGAGACAATCCTTTCTTCTGAAATATTAAGATATATGCATGTTGGATTGTTGTGCGTACAAGAAAAACCAGGAGATAGACCAGACATGTCATCTGTAATTCTTATGCTGAATGGTGAGAAATTATTGTCTCAACCGAAAGCTCCGGGATTTTATACTGGTACGAGCTTACCTGAACCAATATCGCCATCTTCAAATCAGATGTCAATTACAATTCTTGAGGCAAGATAG 837 0.3823 MSDQGSEEFKNEVLLIAKLQHGNLVKLLGCCIHREETLLIYEYLPNRSLDYFIFDETRSKLLAWSKRSDIIAGIARGLLYLHQDSRLRIIHRDLKLSNILLDAHMNPKISDFGLAREFCGDQVEARTRKLVGTYGYMPLEYAMHGRYSMKSDVFSFGVIVLEIISGKKFKVFYYSEHSLNLLGHAWRLWIENMVLELVDPHVIETILSSEILRYMHVGLLCVQEKPGDRPDMSSVILMLNGEKLLSQPKAPGFYTGTSLPEPISPSSNQMSITILEAR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1998 278 SMART serkin_6 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1998 278 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Tpr7g1998 278 Gene3D Transferase(Phosphotransferase) domain 1 44 249 - -
Tpr7g1998 278 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1998 278 SUPERFAMILY Protein kinase-like (PK-like) 5 252 IPR011009 -
Tpr7g1998 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 89 101 IPR008271 GO:0004672|GO:0006468
Tpr7g1998 278 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 276 - -
Tpr7g1998 278 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 276 - -
Tpr7g1998 278 Pfam Protein tyrosine and serine/threonine kinase 4 236 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1998 Tpr-Chr7 24511404 24512957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1998 2 253 Receptor kinase-like Gene Family AT4G11530 61.024 1.07e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1998 PK_Tyr_Ser-Thr 2.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1998 - - mtr:MTR_8g465570 493.041