Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1997 ATGATTGATAGCATCACAGTGATTTTTTGTTTGTTCTTTTTATGTTCCTACTTGAGAACAAGCACTTCACTTGACAGTTTATCATTGAATCAATTCATCAAAGATGGCGAGACATTAGTTTCAGCTAATGGAACTTTTGAAATGGGTTTCTTTAGTCCTGGAAATTCAAAAGGTCGTTACTTGGGTATGTGGTATAAGAAGTTAACCCCTTTAACTGTTCTATGGGTGGCTAATAGGGAAACACCAGTACATAATAACTCAGGAGTCTTAAAACTCAATGAAAACGGTGATCTTGTCGTTCTCAATGGAGAAAACACCATGGTTTGGTCCTCCAACATATCATCAAATAGAGTCGTAGTTAATAATTCAATAACTGCAAAGTTCTTGGAAACGGGGAATCTTGTGTTGAAAACTGGGAAGGGGGATATTGTGTGGCAGAGTTTTGATTATCCAACTGATACATTATTGCCGGGAATGAAGGTTGGATGGAACTTCATAACTGGTCTAAACAAGAAGCAAACATCGTGGAAAAGTATCGATGATCCAGCAAAGGGAGAATATTCCAGTGCTATTGACCCGAGAGGATATCCTCAAGCAGTTATTTTGAAGGGATCTGTCATAAGATTGAGAATAGGATCGTGGAACGGACGTGCTTTTACTGGATATCCAACACAGCCATTGAAAGAAAAGCAAAGGTTTGAATTTGTCATAACTGACAAAGAAGTGTATCATAGTTTTGAAGTTGTTGATAGCTCTATTATTTGCACATATAAATTATCCCTCCTAGGAAATTTGCAGGCTTTATGTTGGACAAGTCAATCAAGTTCTAGGATAATTATCTACACCGGTGCAGAAGATTCGTGTGATAATTATGCTATGTGTGGTGCTAATTCTATATGTAATATGGATGGTAATGTTCCTAAATGTGAATGTTTGAAAGGTTATGTTCCTAAATTTCCTGAACAATGGAATATATCGTATTGGTCTAGCGGTTGTATTGCAAAAATTATATCGGTTTGTGGAAACAAAAACACAAGTGGATTCTTCAAGTATAGAGAAATGAAATTGCCAGACACATCTTCATCGTGGTATAATAAGACTATGAATCTTGTGGAATGTCAGAAGACATGTATGAAAAATTGTTCGTGTGCAGCTTACGCAAATCTGGACATCCGAAATGGAGGAAGTGGTTGTCTTCTTTGGTTTGGTGATCTGGTTGACATGAGAGTATTCACCAAATGGGGACAAGACCTCTATATAAGAGTCCCTTCTTCAGAACTAGCTGACTACCTTAGTGTCGATGCACTTCGAAGCAAGAAAAAGCAGCTGATGCGGATCATACTTGGCCTGATTACTGTTGGATTTTTCACATGTGCCTGCATAATGTTATTTATAAGGAGAGCAGCACAGAAAGGATACAGTCTTGCAGCATTTCGAAAGCGGAAACTATATTGTAAATTGACAAAGGAAGACATGGATCTTCCAATATTTGATTTTTCAGTTCTTGTTAAAGCCACTAATAACTTTTCATGCGTAAATAAACTCGGGGAAGGTGGATTTGGACCAGTGTATAAGGGTACGCTCGTAGAAGGGAAGGAGGTAGCCATAAAACGGCACTCAAAAGTGTCAGATCAAGGATTGGAAGAGTTTAAAAATGAAATTGTGTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTCTAATCATAAAGAGGAAATGCTGTTGATATATGAATACATGCCCAACAAGAGCTTAGACTACTTTATTTTTGATGAAACCCGAAGCAAGCTCTTGGCCTGGACTCACCGTTCCAACATTATTGTTGGCATTGCTAAAGGACTTCTTTATCTTCACCAAGACTCTAGACTCAGAATTATTCATAGAGATTTGAAAACCAGCAATATCCTGTTAGATGCCCATATGAATCCAAAAATAGCAGATTTTGGCTTGGCTCGGATATTCGGCGGAGATCAAATTGAAGCCAAAACAAGAAAAATGGTTGGGACATATGGTTACATGCCTCCAGAGTATGCTGTACATGGTCGTTACTCTATGAAATCAGATGTGTTTAGTTTTGGCGTAATAGTATTGGAGATAATCAGTGGGAATAAGATCAAGGGGTTTTATGACCCAACACACTCTCTCAACCTTCTTGGATATGCTTGGAGACTCTGGATTGAAAACATGCCGTTGGAACTACTGGATACACATTTACTCGATATGTGCATTTCTTCTGAAGTCATCCGATGCATACATGTGGGGTTATTATGCGTACAACAAAAACCCGAAGATAGGCCATGCATGTCCTCTGTCATTCTTATGTTGAATGGTGAGAAATTATTGCCTCAACCGAAGGCTCCTGGATTTTATACCGGCAAGGGTTCAAATGAAACCGCGTCCTCATCCTCAAATCATATGTCACTTACAATTTTTGAGGCAAGATCAAACCATTTTCTATACCATAACCTCACAATCCTACATAAAAGGTACTGCAGTTGCTCCTACAAAACAAACAATTTTTATTTTATTTTTGATAGCATTATAATGTTAGTGCTTTTGTTTATTTTATTCTTGTATATAAGAATAAGCTTTTCGTTAGAGAGTTTAGCTGTGAATCAGACTATCCGAGATGGTCAGACTTTAGTTTCGCCGAATGGAACTTTTGAACTCGGTTTTTTTAATCCTCCTGGAAATTCAAGAGGAAGATATTTAGGTATGTGGTATAGGAATTTATTACCTTTGACAGTCGTTTGGGTTGCCAACAGAGAAAAACCTGTGCAGAATAATTCTGGAATCTTGAAACTCGATGAAAATGGAGTTATTGTGGTTCTTAACGGTGCAAACGGAAGTGTTTGGTCATCTAATATGTCGAACAAGGTGGTGAATAATTCGATAACTGCACAGTTATTGGACACGGGAAATTTTGTGTTGAGAATTGGGAAGGATAATGTTTTGTGGCAGAGTTTTGATTATCCGTGTGATACGTTATTGCCAGGAATGAAGCTTGGATGGAACTTAGTAACCGGTCTTAATCGGTTTGTGACATCTTGGAAAACTGCAGATGATCCGGCAATGGGAGAGTATTCTGTGAAAATTGACAAAAGAGGATTTCCTCAGCTAGTTATTAGGAAGGGATCTGTAAATAAATTTAGAATTGGCTCATGGAATGGACTTGGTTTTACGGGATATCCAATTCAACAATTGAAGCAGAAACAAAGATTTAAATTTGTCTTCAATGAAAAAGAAATTTATCATCAATATGAAGGAATTGATCGCTCTGTTGTCTCCTTTTATTTGGTGACCACTTCAGGTAATTTGCAGGTTTTAGCGTGGACAAGTAAAGAAAGCAGTAGAATAGCTATCTACACTGGGGGAGAGGATTCATGTGATAATTACGCTATGTGTGGTGCTAATTCTATATGCAATATGGACGGCAACATTCCCAAATGTGAATGCTTGAAAGGTTTTGTTCCTAAGTTTCCTGAACAATGGAATATGTCGTATTGGTCTAGCGGTTGTGTTCAAAGGTTTAACTCTGTTTGTGGAGACGATAATTTAGGTGGCTTCTTAGCATACAAAGAAATGAAATTACCAGACACATCTTTGTCATGGTATAACAAAACCATGAACCTTGTGGAATGCCAGAAGTCATGTCTAAAAAATTGTTCGTGTACAGCTTATTCAAATTTGGATATCCGAAATGGAGGAAGTGGCTGTGTGCTTTGGTTTGGTGATCTGGTTGACATGAGGAAATTCTCACAATGGGGACAAGAGTTTTATATCAGAGTCCCTTCTTCGGTACTAGATGAATTCGAACCTGCTGCAGTTAATGGCCACCAAAACAAGAAGAAGATTGGAATCATAGTGGGCGCGATTTCTTTTGGATTAGTTATATGTGTCTGCTTAGTAATACTGAGAAAGCGAGTTGCAGCAAGAGTATACAATATTGTACCATTTCAATGGCAGCAAGAATATTTTAAAGTGATAAAGGAAGACATGGATCTGCCAATAGTTGATTTGTCAATTATTGTTAAAGCCACTGATAATTTTTCTAGTGGAAACAAACTTGGGGAAGGTGGATTTGGACCAGTATACAAGGGTACCCTCACAGATGGAAAAGAGGTTGCCATCAAACGAAACTCGAAGATGTCTGATCAAGGATTGGATGAGTTTAAAAATGAAGTTTTCATGATTGCAAAACTTCAGCATCGTAATCTTGTGAAGCTTCTTGGTTGCTGTATTGAAGGAGAGGAAAAAACATTGATCTATGAATACATGCCCAACAGGAGCTTGGACTACTTCATTTTTGATGAAACAAGAAGCAAGGTTTTGGGATGGTCTCAACGTTCCTACATTATTGCTGGCATTGCTAGAGGTCTTCTCTACCTTCATCATGATTCTAGACTGAGAATTATTCACAGAGATTTGAAAACTAGCAATATCCTACTCGATGCCCATATGAATCCAAAAATCTCAGATTTTGGTCTAGCTCGAATATTTGGGGTTGATCAAATTGAAGCCAAAACTAAGAGAATGGTTGGAACCTATGGCTACATGCCTCCAGAGTATGCCGTGCATGGCCATTACTCCATAAAATCAGATGTCTTTAGTTTTGGTGTATTGGTACTAGAGATAATTAGCGGTAAAAAGAATAAGGGATTTTCAGATCCGGAACACTCCCTTAACCTTCTTGGACACGCATGGAGACTCTGGACTGAAAACAGACCATTGGAATTGCTAGATAGACACTTACTTGAAACATGTAATTCTTCTGAAGTCTTTAGATGCATACATGTGGGTTTGTTGTGTGTGCAACAAAAACCAGCGGATAGGCCAGACATGTCTTCTGTCATTCTTATGCTGAATGGTGAGAAACTATTGCCTCAGCCGAAGATGCCTGGATTTTACACCGGAAGAGGTTTACCTGAAGCAATTTCCTCGAATCAGATGTCAGTAACTACATTTGTGGCAAGATAG 4992 0.3826 MIDSITVIFCLFFLCSYLRTSTSLDSLSLNQFIKDGETLVSANGTFEMGFFSPGNSKGRYLGMWYKKLTPLTVLWVANRETPVHNNSGVLKLNENGDLVVLNGENTMVWSSNISSNRVVVNNSITAKFLETGNLVLKTGKGDIVWQSFDYPTDTLLPGMKVGWNFITGLNKKQTSWKSIDDPAKGEYSSAIDPRGYPQAVILKGSVIRLRIGSWNGRAFTGYPTQPLKEKQRFEFVITDKEVYHSFEVVDSSIICTYKLSLLGNLQALCWTSQSSSRIIIYTGAEDSCDNYAMCGANSICNMDGNVPKCECLKGYVPKFPEQWNISYWSSGCIAKIISVCGNKNTSGFFKYREMKLPDTSSSWYNKTMNLVECQKTCMKNCSCAAYANLDIRNGGSGCLLWFGDLVDMRVFTKWGQDLYIRVPSSELADYLSVDALRSKKKQLMRIILGLITVGFFTCACIMLFIRRAAQKGYSLAAFRKRKLYCKLTKEDMDLPIFDFSVLVKATNNFSCVNKLGEGGFGPVYKGTLVEGKEVAIKRHSKVSDQGLEEFKNEIVLIAKLQHRNLVKLLGCSNHKEEMLLIYEYMPNKSLDYFIFDETRSKLLAWTHRSNIIVGIAKGLLYLHQDSRLRIIHRDLKTSNILLDAHMNPKIADFGLARIFGGDQIEAKTRKMVGTYGYMPPEYAVHGRYSMKSDVFSFGVIVLEIISGNKIKGFYDPTHSLNLLGYAWRLWIENMPLELLDTHLLDMCISSEVIRCIHVGLLCVQQKPEDRPCMSSVILMLNGEKLLPQPKAPGFYTGKGSNETASSSSNHMSLTIFEARSNHFLYHNLTILHKRYCSCSYKTNNFYFIFDSIIMLVLLFILFLYIRISFSLESLAVNQTIRDGQTLVSPNGTFELGFFNPPGNSRGRYLGMWYRNLLPLTVVWVANREKPVQNNSGILKLDENGVIVVLNGANGSVWSSNMSNKVVNNSITAQLLDTGNFVLRIGKDNVLWQSFDYPCDTLLPGMKLGWNLVTGLNRFVTSWKTADDPAMGEYSVKIDKRGFPQLVIRKGSVNKFRIGSWNGLGFTGYPIQQLKQKQRFKFVFNEKEIYHQYEGIDRSVVSFYLVTTSGNLQVLAWTSKESSRIAIYTGGEDSCDNYAMCGANSICNMDGNIPKCECLKGFVPKFPEQWNMSYWSSGCVQRFNSVCGDDNLGGFLAYKEMKLPDTSLSWYNKTMNLVECQKSCLKNCSCTAYSNLDIRNGGSGCVLWFGDLVDMRKFSQWGQEFYIRVPSSVLDEFEPAAVNGHQNKKKIGIIVGAISFGLVICVCLVILRKRVAARVYNIVPFQWQQEYFKVIKEDMDLPIVDLSIIVKATDNFSSGNKLGEGGFGPVYKGTLTDGKEVAIKRNSKMSDQGLDEFKNEVFMIAKLQHRNLVKLLGCCIEGEEKTLIYEYMPNRSLDYFIFDETRSKVLGWSQRSYIIAGIARGLLYLHHDSRLRIIHRDLKTSNILLDAHMNPKISDFGLARIFGVDQIEAKTKRMVGTYGYMPPEYAVHGHYSIKSDVFSFGVLVLEIISGKKNKGFSDPEHSLNLLGHAWRLWTENRPLELLDRHLLETCNSSEVFRCIHVGLLCVQQKPADRPDMSSVILMLNGEKLLPQPKMPGFYTGRGLPEAISSNQMSVTTFVAR* 1664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1997 1663 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Tpr7g1997 1663 Pfam PAN-like domain 340 408 IPR003609 -
Tpr7g1997 1663 Pfam PAN-like domain 1192 1254 IPR003609 -
Tpr7g1997 1663 Gene3D - 19 148 IPR036426 -
Tpr7g1997 1663 Gene3D - 868 994 IPR036426 -
Tpr7g1997 1663 ProSiteProfiles PAN/Apple domain profile. 1186 1269 IPR003609 -
Tpr7g1997 1663 SUPERFAMILY alpha-D-mannose-specific plant lectins 921 1028 IPR036426 -
Tpr7g1997 1663 CDD B_lectin 877 997 IPR001480 -
Tpr7g1997 1663 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 817 - -
Tpr7g1997 1663 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 862 1660 - -
Tpr7g1997 1663 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Tpr7g1997 1663 ProSiteProfiles Protein kinase domain profile. 1355 1632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1997 1663 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 817 - -
Tpr7g1997 1663 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 862 1660 - -
Tpr7g1997 1663 Gene3D Hepatocyte Growth Factor 340 417 - -
Tpr7g1997 1663 Gene3D Hepatocyte Growth Factor 1187 1265 - -
Tpr7g1997 1663 ProSiteProfiles EGF-like domain profile. 1130 1167 IPR000742 -
Tpr7g1997 1663 CDD PAN_AP_plant 1187 1269 - -
Tpr7g1997 1663 SMART ntp_6 343 422 IPR003609 -
Tpr7g1997 1663 SMART ntp_6 1189 1268 IPR003609 -
Tpr7g1997 1663 ProSiteProfiles Protein kinase domain profile. 509 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1997 1663 ProSiteProfiles Bulb-type lectin domain profile. 871 995 IPR001480 -
Tpr7g1997 1663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Tpr7g1997 1663 CDD STKc_IRAK 515 782 - -
Tpr7g1997 1663 ProSiteProfiles Bulb-type lectin domain profile. 24 149 IPR001480 -
Tpr7g1997 1663 Pfam Protein tyrosine and serine/threonine kinase 1357 1623 IPR001245 GO:0004672|GO:0006468
Tpr7g1997 1663 SMART blect_4 877 997 IPR001480 -
Tpr7g1997 1663 SMART blect_4 30 151 IPR001480 -
Tpr7g1997 1663 SUPERFAMILY Protein kinase-like (PK-like) 492 803 IPR011009 -
Tpr7g1997 1663 CDD STKc_IRAK 1361 1628 - -
Tpr7g1997 1663 CDD PAN_AP_plant 341 423 - -
Tpr7g1997 1663 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Tpr7g1997 1663 Pfam D-mannose binding lectin 920 1023 IPR001480 -
Tpr7g1997 1663 Pfam D-mannose binding lectin 72 177 IPR001480 -
Tpr7g1997 1663 Gene3D Transferase(Phosphotransferase) domain 1 585 787 - -
Tpr7g1997 1663 Gene3D Transferase(Phosphotransferase) domain 1 1431 1632 - -
Tpr7g1997 1663 SMART serkin_6 509 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1997 1663 SMART serkin_6 1355 1626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1997 1663 Pfam Protein kinase domain 512 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1997 1663 CDD B_lectin 30 151 IPR001480 -
Tpr7g1997 1663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1476 1488 IPR008271 GO:0004672|GO:0006468
Tpr7g1997 1663 Gene3D Phosphorylase Kinase; domain 1 1323 1430 - -
Tpr7g1997 1663 Gene3D Phosphorylase Kinase; domain 1 472 584 - -
Tpr7g1997 1663 SUPERFAMILY Protein kinase-like (PK-like) 1338 1626 IPR011009 -
Tpr7g1997 1663 Pfam S-locus glycoprotein domain 1055 1165 IPR000858 GO:0048544
Tpr7g1997 1663 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1997 Tpr-Chr7 24490823 24505564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1997 472 795 Receptor kinase-like Gene Family AT4G23140 55.917 3.98e-115 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr7g1997 PK_Tyr_Ser-Thr 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1997 - - aprc:113865090 2002.64