Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1987 ATGGAGACAGAAAGCCAGCTCCAAGTTTCATCAAACTCAGGACAACCCAAAGAAGGAACCTCTTTTTTCAAAGCTTGTTTCAATGGTATCAACACTTTGGCAGGAATTGGGATGCTCTCAATGCCATATGCAGTTTCTGAAGGAGGGTGGTTGAGTTTTATGATGCTATTTATTTTTGCCATGATATGTTGGTACACTGCTTTACTTCTAGAAAGGTGTATGAATGAACAACCATTAATCAAATCCTATGTTGATATAGGTCAGGTTGCTTTTGGTTACAAAGGAAGAGCTGTGATAGCAAGTTTTATATATTTAGAGTTATTTTTAATTGCTGTTGAGCTTCTTATATTAGAAGGTGACAATTTGGAGAAGTTGTTTCCAAATATGAGCCTTACAATTATTGGATTTAAAATTGGAAGTAAAACAGGTTTTGTGTTAATCACAGCTTTGGTAGTATTACCAACAACTTGGTTGAGAAGTTTAGGAGCTTTGGCCTACATATCTGTTGGTGGTATATTTGCTTCTGTTATTTTAATTGGTTGTGTTTTGTGGGTGGGAGAAGTTGATGGTGTTGGATTTCATGAAAGAGGGAAATTAGTAAATTTGGAAGGATTATCTACTGCTATGAGCCTTTTTGCTTTTTGTTACTGTGCTCATGCATTATTGCCAACAATATGCAATTCTATGAAAGATAGAAAGCAATTCTCCAAGGTTTTGCTGGTTTGTTTTGTTGCAAGCACAATTATCTATGGAACTGTAGCAGTTTTAGGCTACAGGATGTTTGGAGATCATTTGAAGTCTCAGATCACATTAAATCTACCAACAAATACAATAAGTACAAAAATAGCTATATATACCACAGTAATTAATCCTTTCACTAAGTATCCTATTGTAATCACTCCAATAACCAATGCCATAGAGGAAAAATGGCATCTATGCAAGAGCAGACCAATTAGCATTCTCTTTAGAACAACCATTGTGGTCAGCAGTGTACTTGTGGCACTATTTGTTCCATTTTTTGGGTACATTATGGCGTTTATTGGTGCTTTCTTGAGTGTGGCAATCTCATTGTTGTTTCCTTGCCTTTGCTACTTAAAGATTCACAAAGCTGCTAGGCGATTTGGGTTAGAGTTGATCATTATCATAGGAATTCTGATCATTGGTACACTTATTGGAATACATGGTACCTACATTTCACTTGTGAAAATAGCAAAAAATATAAAGTCATGA 1230 0.3553 METESQLQVSSNSGQPKEGTSFFKACFNGINTLAGIGMLSMPYAVSEGGWLSFMMLFIFAMICWYTALLLERCMNEQPLIKSYVDIGQVAFGYKGRAVIASFIYLELFLIAVELLILEGDNLEKLFPNMSLTIIGFKIGSKTGFVLITALVVLPTTWLRSLGALAYISVGGIFASVILIGCVLWVGEVDGVGFHERGKLVNLEGLSTAMSLFAFCYCAHALLPTICNSMKDRKQFSKVLLVCFVASTIIYGTVAVLGYRMFGDHLKSQITLNLPTNTISTKIAIYTTVINPFTKYPIVITPITNAIEEKWHLCKSRPISILFRTTIVVSSVLVALFVPFFGYIMAFIGAFLSVAISLLFPCLCYLKIHKAARRFGLELIIIIGILIIGTLIGIHGTYISLVKIAKNIKS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1987 409 Pfam Transmembrane amino acid transporter protein 19 398 IPR013057 -
Tpr7g1987 409 PANTHER OS06G0228500 PROTEIN 16 404 - -
Tpr7g1987 409 PANTHER OS05G0424000 PROTEIN-RELATED 16 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1987 Tpr-Chr7 24247625 24250561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1987 1 403 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.059 9.20e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1987 K15015 - gmx:100812006 586.645