Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1982 ATGGAAGAGAGAAATGGTTGTGAGAAACTTGACGAGATTATGCTTCCGGGGTTTAGGTTTCATCCAACAGATGAAGAACTTGTTGGATTTTACCTAAAGAGAAAGATTCAACAACGTCCTCTTGCTATTGAGCTCATCAAGCAGCTTGATATTTATAAATTTGATCCTTGGGATCTTCCAAAGTTGGCAAGTACAGGGGAGAAAGAGTGGTATTTTTACTGTCCAAGAGACAGAAAGTACAGGAACAGTACAAGACCTAATAGGGTAACAAAAGCTGGGTTTTGGAAAGCTACAGGAACAGATAGACCTATTTATTCATCAGAGGGTTCTAGGTGTATTGGTTTGAAGAAATCCTTAGTTTTCTACAAAGGTAGAGCTGCTAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATTGACTCATCATCATCTCCAAAGAAATATGTAGACAAGACCATTCCTGCTAATGAATCTTGGGCAATCTGCAGGATATTCAAGAAAACAAATGCAACAGCTCAAAGAGCTCTCTCTCACTCATGGGTCCCACCTTTACTTGAAACATCCACCTCCAATGTTTTAACCAATGATGGAAACCAAAACCAATTTTATTCATCTAACATGATCTTGACAAAAAAACCTATGATAAACCAATTTTGTTCTACTACTAATAACACAACACAACAATTAACCACTTCTAGTAGTACAACACTTTGTCCTTTAGATGTTACATCTTATAATGATAAACCAATTATTGATCCATTGATTTACAAACCCTTATACCGATTACCATTTTCAAATGATCAAGATCTTAACCTTAGCACCGGCTCATTATTCTCTTCTCCTCTGGAAACATCTTGTAACAAAACTTCAATGGATATTTCTTCTTTGCTATTGGGTATGTCATCTGAAGGAACAACCTCAAACTACACTAATGGTTTACAAGATCACTACAATAATGAGTATCCATTTATGGCTAATATTATTCCTAATGTGAATGTGCCACATGTTGATGAACAAGAATTGGAGACAGTAAGATCCATTGGATTTCCATTTACTATGCCTTTCAATATTGGTGATGCATGGAAATCAAGTTTTGTTTGGGATACTTCCTCTTGTACTTCTGATGAACCCTCTAGTTATTCTACTACCAAGTGTTATACTTAG 1182 0.3621 MEERNGCEKLDEIMLPGFRFHPTDEELVGFYLKRKIQQRPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTKAGFWKATGTDRPIYSSEGSRCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHSWVPPLLETSTSNVLTNDGNQNQFYSSNMILTKKPMINQFCSTTNNTTQQLTTSSSTTLCPLDVTSYNDKPIIDPLIYKPLYRLPFSNDQDLNLSTGSLFSSPLETSCNKTSMDISSLLLGMSSEGTTSNYTNGLQDHYNNEYPFMANIIPNVNVPHVDEQELETVRSIGFPFTMPFNIGDAWKSSFVWDTSSCTSDEPSSYSTTKCYT* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1982 393 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Tpr7g1982 393 ProSiteProfiles NAC domain profile. 14 173 IPR003441 GO:0003677|GO:0006355
Tpr7g1982 393 Gene3D NAC domain 23 178 IPR036093 GO:0003677|GO:0006355
Tpr7g1982 393 SUPERFAMILY NAC domain 14 173 IPR036093 GO:0003677|GO:0006355
Tpr7g1982 393 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 391 - -
Tpr7g1982 393 PANTHER PROTEIN FEZ ISOFORM X1 1 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1982 Tpr-Chr7 24132076 24135743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1982 1 260 NAC Transcription Factor Family AT1G26870 63.197 1.05e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g1982 NAM 6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1982 - - vun:114179488 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1982 7 24132076 24135743 Tpr7g1982 7 24132076 24135743 ECH