Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1951 ATGGCTAACGAGCCTAAAAATGCACAGCTGACATTGCTCTATGATGGAAAAACTTTTGTGTTGGATGATTTTCCTGCTGACAAATTGGACGACTTAAAGTCAATTGCCAAAACTCTGACTCAGCCTGGAATTGAAAATGCGTTGGCAAATCATCCCGAGGAATGGGAGCAATTTGCGGCCTATGTAACTGGGAAATGTTTGGAAGAAGTTAAGCGTCATTATGTGGATTTGATTGATGATGTCAACCACATTGAATCTGGTTATGTGCCTCTGCCAGCTTATAATGAACTGAGAACTGTCAAAAAGGGAACTGAGACTTCAAGAACTGTTCAAGAACGGCGAAAGGTTATTCATTGGACAGAAGCTGAACATAGGTTATTTCTTCAAGGCTTGGAGAACCATGGATGGGGTGACTGGCAAAGTATATCAAGGAACTGTGTGGTAACAAGAACACCTACACAAGTAGCAAGCCATGCTCAGAAATATAAAATTCGACAGAATTCAAAGGAGAAGAACAAAGAAAGAAAGCGTTCCAGCATACATGATGTCACCCATGTAAAAAATGATGACATTTCAGCACCTCAAGGACCAATTACCAGTCAAACAAGCGGTTCTGCAGCAAGTTCTTCTGGACAAACAGCCGAACAAGCTCCTACATCCCCACCTGCTGGAATTTATGCTGCTCCTAGGATCGAGCAACCTATTGGAGGACCTCTTGTATCTGCAGTTGGCACTAAAGTGAATCTTACTGCTGCTGGACAATCACCGGAACAAGCTCCGACAACCCCACCTGTTGGAATTTATGCTGCTCCTAGGATCGAGAACCCTATTGGACGACCCCTTGTATCTGCAGTTGGCACTCCAGTGAATCTTTCTGCTGCTGGAAAATCAGCCAAACAAGCTCCTCCAACCTCACCTGCTGGAATTTATGCTGCTCGTAAGATTGAGTACCCTATTGGAGGACATCTTGTATCTGCAGTTGGCACTCCAGTGAATGTTTCTGCTGCTGGACAATCAGCCGAACAAGCTCCTCCCACTGGAATTTATGCTGCTCCTAAGGATCGAGCACTCTATTGGAGGATCCCTTGTATCTGCAGTTGGCACTCCAGTGAATCTTACTGCTGCTGGACACATGGCTTATGA 1143 0.4479 MANEPKNAQLTLLYDGKTFVLDDFPADKLDDLKSIAKTLTQPGIENALANHPEEWEQFAAYVTGKCLEEVKRHYVDLIDDVNHIESGYVPLPAYNELRTVKKGTETSRTVQERRKVIHWTEAEHRLFLQGLENHGWGDWQSISRNCVVTRTPTQVASHAQKYKIRQNSKEKNKERKRSSIHDVTHVKNDDISAPQGPITSQTSGSAASSSGQTAEQAPTSPPAGIYAAPRIEQPIGGPLVSAVGTKVNLTAAGQSPEQAPTTPPVGIYAAPRIENPIGRPLVSAVGTPVNLSAAGKSAKQAPPTSPAGIYAARKIEYPIGGHLVSAVGTPVNVSAAGQSAEQAPPTGIYAAPKDRALYWRIPCICSWHSSESYCCWTHGL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1951 380 Pfam Myb-like DNA-binding domain 119 163 IPR001005 -
Tpr7g1951 380 MobiDBLite consensus disorder prediction 193 219 - -
Tpr7g1951 380 MobiDBLite consensus disorder prediction 166 188 - -
Tpr7g1951 380 ProSiteProfiles Tify domain profile. 3 38 IPR010399 -
Tpr7g1951 380 PANTHER TRANSCRIPTION FACTOR SRM1 254 295 - -
Tpr7g1951 380 PANTHER TRANSCRIPTION FACTOR SRM1 45 252 - -
Tpr7g1951 380 SUPERFAMILY Homeodomain-like 112 168 IPR009057 -
Tpr7g1951 380 ProSiteProfiles Myb-like domain profile. 111 163 IPR001005 -
Tpr7g1951 380 Gene3D - 43 91 - -
Tpr7g1951 380 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 117 166 IPR006447 GO:0003677
Tpr7g1951 380 Pfam tify domain 4 31 IPR010399 -
Tpr7g1951 380 Gene3D - 117 168 - -
Tpr7g1951 380 ProSiteProfiles SANT domain profile. 119 167 IPR017884 -
Tpr7g1951 380 SMART sant 115 165 IPR001005 -
Tpr7g1951 380 MobiDBLite consensus disorder prediction 166 227 - -
Tpr7g1951 380 CDD SANT 119 163 IPR001005 -
Tpr7g1951 380 PANTHER TRANSCRIPTION FACTOR KUA1 45 252 - -
Tpr7g1951 380 PANTHER TRANSCRIPTION FACTOR KUA1 254 295 - -
Tpr7g1951 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 167 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1951 Tpr-Chr7 23546927 23551005 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr7g1951 Myb_DNA-binding 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1951 - - gmx:100819797 230.72