Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1949 ATGGTAAAATTTGATGAATCTCTAGATGTTGATTCTAATGAAGTTAGTTCAACTGATAGTCATACATCTGATGATGAGGATTCCAGCTATTCGGCATCCAGTGGGCATGATAGGTCAGATGATGGCGATGATACTGGTGACCACCATCATGATGATGATGATGATGATGATGGCAATGACCATGATTTTGATGATGAAGCATCTATAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGAATTTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAATGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGTCAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCACCGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCAGATAAGGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAAATTAGCAAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGTAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACTAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACCAGAAGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACTGAGACGTATAAGTGGGTATTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGGGAGGCTATAAAAGAGGTTTTCCCCGATTCAACCCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTTTGAAGGGATTTAAAAAAGCCATGTTCTCAAATATTTCAAAGGATGATTTTGAAGAGTATTGGTCTGAGATGATTAAAGAAAATGGAGTTGAAGGACATCCTTGGGTTATCAAAACCTACGAGAACAAGTTTCTATGGGCAACTGCATACCTTCGGGATAAGTTTTTTGGACGTATAAGAACTACGTCTCAACGTGAAGCAATCAATGCAATAATAAAGAGTTATGTCAGAATGAAAGGATGCATCTTTGAATTTATGCAAAATTTTGAGCAGGCTCTAAGAGGCTACAAAAACAATGAACTTGTTGAAGATTTTAAGTCAAAGTTTTCAGAACCTGTGTTGACAACTCAACTACGTTTGATTGAGAGCAATGCCGCTAAAATCTATACAGCGGAGATTTTCAAAGAAGTGAAAGAAGAAATTATGAAGGCCGGTGAATTGATTGTTAAGCATAAAAAGGAAATTGGAGATACAAAGTTTTATACTTTGACTAAATATTGTCGGGATGCGTATGAAAGGACAGTTGTTTACGATGGTGATACATTCCAATGTTCGTGCCGGTTGTTTGATTCTCGTGGACTTCCTTGTTCTCATATTTTTCACGTGATGAAGGAAGAACATGTTGATCACATTCCTAGCACTTTGGTATTGTCGCGATGGACCAAGGATGCTAAAATTGATTATTTGAACATGGTGGATGTTAATGATCCAATTGATTCCGATGTGATTGAGCTTGCCCGTTTTGGTGCATATTGTTCTGTTTTGACATCATTTTGCAAAGAAGCTTCTAAAAAGAATGGTGTGTATGGGGACATTATGGATGACCTCATGAATTTAAAAAAAAAATATTGCAGTGTTGAGGATCCTATTGGAACACAAAAGTCAGTTGTTGGTGATCCTATCCCGGTTCAGAGTAAAGGTGCTCCAAAGAAAAAAAAGAATGACACAAAAGCTCTCAGGCATTGTACTCATTGCAAGAGTACAACTCATAACGCGAGGACTTGTTCGGACAAAAAGAGAAAAAAAAGTTGCAACGCTGAAAGTAGTGTGCAAGACATAAATTCAGAGCTACCGGTTGACCTTTGTGAAAGTGGTGTGCAACAGAAAAAGAAGAAATGTGCAGAGCAACCGAAAGACCTTTGTGAAAGTAGTGCGCCACAGAAAAAGAAGAAATGTTCAGAGCTACCGAAAGATCGTTGCGAAAGTATTGTGCAAAAGAAAAATAAATGTTCGGTGCAACTGAAAGAGCGTGGCGCTAATGTGTCAACACCAACACATATTGATGTTACTAGTGCGATCGGGCAATTCACTCCGATGTATGGATTTCAACCTATGATTCCTATGTTACATCCGGTTATGCAACAGATGCACGTACCATCTGGACAACATGTTCCACCTGCACAACATGTAACTTCTGTACCACATGTACCACCTGTATACCAAGTGTATGGAATGAATGTTGGTGCAAATTCAACTTCGTGTTATGGTCTGTTACAACATGTGATGAAATCTGCTGATGTACAACAATGA 2784 0.3869 MVKFDESLDVDSNEVSSTDSHTSDDEDSSYSASSGHDRSDDGDDTGDHHHDDDDDDDGNDHDFDDEASIGERAVRINSMTADEIRGMNFGSVDEAYEFYYQYGKCKGFSVRKCDDKKKIGPDGSKIITNKLFVCSSQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISKADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYQKNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDSTHRLCAWHLNKNAGENVKNSGFLKGFKKAMFSNISKDDFEEYWSEMIKENGVEGHPWVIKTYENKFLWATAYLRDKFFGRIRTTSQREAINAIIKSYVRMKGCIFEFMQNFEQALRGYKNNELVEDFKSKFSEPVLTTQLRLIESNAAKIYTAEIFKEVKEEIMKAGELIVKHKKEIGDTKFYTLTKYCRDAYERTVVYDGDTFQCSCRLFDSRGLPCSHIFHVMKEEHVDHIPSTLVLSRWTKDAKIDYLNMVDVNDPIDSDVIELARFGAYCSVLTSFCKEASKKNGVYGDIMDDLMNLKKKYCSVEDPIGTQKSVVGDPIPVQSKGAPKKKKNDTKALRHCTHCKSTTHNARTCSDKKRKKSCNAESSVQDINSELPVDLCESGVQQKKKKCAEQPKDLCESSAPQKKKKCSELPKDRCESIVQKKNKCSVQLKERGANVSTPTHIDVTSAIGQFTPMYGFQPMIPMLHPVMQQMHVPSGQHVPPAQHVTSVPHVPPVYQVYGMNVGANSTSCYGLLQHVMKSADVQQ* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1949 927 Pfam FAR1 DNA-binding domain 97 191 IPR004330 -
Tpr7g1949 927 PANTHER OS02G0262500 PROTEIN 83 751 - -
Tpr7g1949 927 MobiDBLite consensus disorder prediction 18 46 - -
Tpr7g1949 927 MobiDBLite consensus disorder prediction 1 59 - -
Tpr7g1949 927 ProSiteProfiles Zinc finger SWIM-type profile. 589 625 IPR007527 GO:0008270
Tpr7g1949 927 SMART 26again6 600 627 IPR006564 GO:0008270
Tpr7g1949 927 Pfam MULE transposase domain 314 408 IPR018289 -
Tpr7g1949 927 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 751 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1949 Tpr-Chr7 23453110 23456002 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g1949 FAR1 3.8e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1949 - - ccaj:109792835 882.478