Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1942 ATGAATGACGACGAGCCTTTACCGGCGATCCTCATGTCGCTGTCTTGTATCTCCGATTGCAAACTCTTCTGCGGCGAGGAAACCACCGGAATCTTAACCGTAGATTCGACTGAATACTCCTCCGATCTCGATTCATCATCGCCGTCGTTGTCATCATTCGCATTGGAAGAGGAGGAGGAGTCCATTGCTGTTTTCATCGAAGACGAGCGTAAGTTCGTTACCGGATTCGATTACTTTTCAAGATTCCAATCTCACTCTCCAGTTGCCAACGCCAGAGAAGAATCCATTGCATGGATTCTCAAGGTACACGCGTACTATGGATTTCAGCCGTTGACTGCGTACCTTTCCGTTAACTATATGGATCGGTTTTTGGATTCTCGACCTCTTCCGGAATCAAAGGAATGGCCTCCGCAACTTTTATCTGTTGCATGTTTGTCTTTAGCAGCAAAGATGGAGGAACCCCTGGTTCCTTCTCTCTTGGACCTTCAGATTGAAGGTGCCAAATACATATTTCAACCGAGAACGATTCTTAGAATGGAGCTACTTGTTCTGACTATTTTGGATTGGAGGCTAAGATCAGTTACCCCACTTAGCTTCCTCAGTTTCTTTGCGTGCAAGCTAGATTCAACCGGAACTTTCACTCACTTCCTTATTTCACGTGCTACAGAAATCATCTCGTCTAATATCCAAGATGCTGGATTTCTTGCTTATTGGCCATCATGCATTGCTGCAGCTTCCATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTTATGTTAAGCCTGAGCATGCTGAATCATGGTGTGAAGGATTAAAAAAAGAAAAAATTATAGGGTGCTATGAGTGGATGCAAGAAATTATGATAAGTAATAACAGAAGAAATCCCCCTAAAGTATTGCCACAGTTGCGAGTGACAACTCAAACCCAAAGGTGGTCCAATGTCTCATCATCATCATCATCATCATCCCCATCTTCCTCTTCTTCATCCTCTTTCTCATTGTCTTATAAAAAAAGGAAATTAATTAACTGTTTCTGGTTAGATGATGACAAAGGAAACTCAGAGTGA 1068 0.427 MNDDEPLPAILMSLSCISDCKLFCGEETTGILTVDSTEYSSDLDSSSPSLSSFALEEEEESIAVFIEDERKFVTGFDYFSRFQSHSPVANAREESIAWILKVHAYYGFQPLTAYLSVNYMDRFLDSRPLPESKEWPPQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFQPRTILRMELLVLTILDWRLRSVTPLSFLSFFACKLDSTGTFTHFLISRATEIISSNIQDAGFLAYWPSCIAAASILSAANEIPNWSYVKPEHAESWCEGLKKEKIIGCYEWMQEIMISNNRRNPPKVLPQLRVTTQTQRWSNVSSSSSSSSPSSSSSSSFSLSYKKRKLINCFWLDDDKGNSE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1942 355 Gene3D - 66 259 - -
Tpr7g1942 355 PANTHER CYCLINS 35 331 IPR039361 -
Tpr7g1942 355 Gene3D - 75 192 - -
Tpr7g1942 355 MobiDBLite consensus disorder prediction 311 335 - -
Tpr7g1942 355 SUPERFAMILY Cyclin-like 175 293 IPR036915 -
Tpr7g1942 355 SMART cyclin_7 97 185 IPR013763 -
Tpr7g1942 355 SUPERFAMILY Cyclin-like 56 191 IPR036915 -
Tpr7g1942 355 CDD CYCLIN 96 184 IPR013763 -
Tpr7g1942 355 Pfam Cyclin, N-terminal domain 62 191 IPR006671 -
Tpr7g1942 355 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 35 331 - -
Tpr7g1942 355 SMART Cyclin_C_2 194 321 IPR004367 -
Tpr7g1942 355 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Tpr7g1942 355 Pfam Cyclin, C-terminal domain 194 318 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1942 Tpr-Chr7 23122869 23128098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1942 12 354 Core Cell Cycle Gene Families AT1G70210 56.812 1.43e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1942 K18810 - gmx:100778578 452.595