Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1921 ATGGATGAATTGGGAAATTGTAGCTGTTATTGGAGTAGAGAGCAAGATATAGCGTTTGAAAATGCGTTGGCAAATCATCCCGAGGAATGGGAGCAATTTGCGGCGCATGTAACTGGGAAAAGTTTGGAAGAAGTTAAGCGTCATTATGTGGATTTGATTGATGATGTTAACCACATTGAATCTGGTTATGTGCCTCTGCCGAATTATAATGAAATAAGAGCTGTCAAAAAGAGAACTAAGACTTCAAGAACTGTTCAAGAAAGGCGAAAGGGTATTCCTTGGACAGAAGCTGAACATAGGTTATTTCTTCAAGGCTTGGAGAACCATGGATGGGGTGACTGGCGAAGTATATCAAGGAACTGTGTGGTAACTGAAATTCCTGGCACACAGTAG 393 0.4122 MDELGNCSCYWSREQDIAFENALANHPEEWEQFAAHVTGKSLEEVKRHYVDLIDDVNHIESGYVPLPNYNEIRAVKKRTKTSRTVQERRKGIPWTEAEHRLFLQGLENHGWGDWRSISRNCVVTEIPGTQ* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1921 130 CDD SANT 93 120 IPR001005 -
Tpr7g1921 130 SMART sant 90 129 IPR001005 -
Tpr7g1921 130 SMART sant 7 55 IPR001005 -
Tpr7g1921 130 Gene3D - 92 126 - -
Tpr7g1921 130 CDD SANT 11 49 IPR001005 -
Tpr7g1921 130 Gene3D - 8 66 - -
Tpr7g1921 130 PANTHER TRANSCRIPTION FACTOR DIVARICATA 79 127 - -
Tpr7g1921 130 PANTHER TRANSCRIPTION FACTOR DIVARICATA 2 73 - -
Tpr7g1921 130 PANTHER TRANSCRIPTION FACTOR KUA1 2 73 - -
Tpr7g1921 130 PANTHER TRANSCRIPTION FACTOR KUA1 79 127 - -
Tpr7g1921 130 SUPERFAMILY Homeodomain-like 87 120 IPR009057 -
Tpr7g1921 130 Pfam Myb-like DNA-binding domain 93 119 IPR001005 -
Tpr7g1921 130 SUPERFAMILY Homeodomain-like 10 59 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1921 Tpr-Chr7 22838007 22852511 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g1921 Myb_DNA-binding 3.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1921 - - gmx:100819797 150.984