Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1897 ATGAGTTCTTGTTTTGTACCTTTTTCTTCTTCACCATCACCACCTAACTCATCAACCAATGAGACTCTCCTTGATGGCTTAAAGTTTGGTAAAAAAATCTACTTTGAAGATGCAACAAGTAGTGTTGTTGTAGCAACTCAAAGTAATTATAATAATACAAAATCATCAATGGTTATGAAAAAGGGTACTCATTTTCCACCTAAGTGTCAAGTTGAAGGTTGTAAAGTAGATCTGAGTGGTTCTAAGGCTTATTATTGTAGACATAAAGTTTGTTGCATGCATTCAAAATCTCCAACTGTTGTTGTCTCTGGTTTGGAGCAGAGATTTTGCCAACAGTGTAGCAGGTTTCATCAGCTGACTGAATTCGATCAAGGAAAACGAAGTTGCCGCAGGCGACTAGCTGGCCATAATGAAAGGCGAAGAAAGCCCCAGCCAAAGTCCTTCTTAACCTCACGTTTTCCCAAACTCTCTCCATATACTCTTGATAATAATGGCAAAGGTGATAACTTTCTGATGGATGCTTCATACCCAAAGTTTTCTCCGAGAACATCTGAGCCAATTCCCGGTAATCAAACAACACAAATTACCTGGCAGCAGAACAACTCAACGACACCATCCGATTTTTTCCTGCAAGGAACAAACTTTCATGGTCCTACTAGACATCCTCCTCCAATGGAAAACTACAATGAAGTCACAGATTCAAGCTGTGCTCTCTCTCTTCTGTCAAACCAAACATGGTATTCTCGAAACACAACAACGGCAAGTGTTGAGATGAACAACTTGTTGAATTTCAACGGTTCGATCATTACACAATCTCCTCAAGGTGCAGCCAATTATCAACTTGCAAATTCCTCTTGGTTTCTAAAAGGCGTTGATTCTCGTAACTGTATGTCGTCTGAGGATGTTCCTGATCTCGGTCTCGGTCAAAATTCACAGGCTATACAGGCTATTCATAGCGATCTTCGTGGTGTGCTTGATGTGTCACAAGGCAAGAGGCAATATAACTAG 1008 0.4048 MSSCFVPFSSSPSPPNSSTNETLLDGLKFGKKIYFEDATSSVVVATQSNYNNTKSSMVMKKGTHFPPKCQVEGCKVDLSGSKAYYCRHKVCCMHSKSPTVVVSGLEQRFCQQCSRFHQLTEFDQGKRSCRRRLAGHNERRRKPQPKSFLTSRFPKLSPYTLDNNGKGDNFLMDASYPKFSPRTSEPIPGNQTTQITWQQNNSTTPSDFFLQGTNFHGPTRHPPPMENYNEVTDSSCALSLLSNQTWYSRNTTTASVEMNNLLNFNGSIITQSPQGAANYQLANSSWFLKGVDSRNCMSSEDVPDLGLGQNSQAIQAIHSDLRGVLDVSQGKRQYN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1897 335 Gene3D - 61 130 IPR036893 GO:0003677|GO:0005634
Tpr7g1897 335 Pfam SBP domain 69 142 IPR004333 GO:0003677
Tpr7g1897 335 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 10 334 - -
Tpr7g1897 335 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 10 334 IPR044817 GO:0003677
Tpr7g1897 335 SUPERFAMILY SBT domain 67 148 IPR036893 GO:0003677|GO:0005634
Tpr7g1897 335 ProSiteProfiles Zinc finger SBP-type profile. 66 143 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1897 Tpr-Chr7 22293600 22296769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1897 27 334 SBP-box Gene Family AT2G42200 38.922 8.62e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Tpr7g1897 SBP 8.5e-32 No_clan