Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1896 ATGGCTCTCAACTCTTCTGCACGTAAAGACTTCACTGACGATGAACTTTTAAAACCATTCCTCTACAACAAAATTCATAATCTACCTTTGCCCAATTATATCAACATTCTTGAACAAGATTTGTTCGGTACTGTAAAAAATCCTTGGCAAATTTGGGAAGAGTTTGAAGCTTCTCATTCATATTCTGGAAAAGACTTGTATGTTTTCTCCATCTTAAGGAAGAAATCTGCTACCAGCACACGCGTAGTTCGCACTATTGGAATGGGTACATGGGAAGGTGAAGACACCGGAAAAAGTATATTCGCCAAAGATACAAATCAACTCCTTGGTATGAAAAAACGTTATCGGTTTGAGAAGAGTGACACTTATCAAGACGGTGGATGGATCGTGCACGAATATAGCCTTGACAAATCTTTAATAAGCAATCCTTCGGCCATCAATTATGTTCTATGCAGATTTAGAAAGAATTCGAAACTGGGTCTACAAAATACAGGAACAAGAATTCATCACCAACCGAATTCACACATACCAAATTGCAGTGTCGTACCAAGAAAAAATCCAAAAATGAACAATGTTGGACAATCACAAAGAAAGACCGTTGCCGTTCCTCCACGTGCGCCAGTTGCCGTTCCTCCACGTGCGGCAGCAACCACCATACCCGAGAACAATAGTACTTGGTTGGGGGAAAATATTGACCAAAATCCAAGAAATCAACTTGACAGTGTAAATAACAAGACCGAGGCTGTTAAAATTACTAATGAAACAGAGCGCAAATTTAACAAAGAAGAACATTGCGCTATGAACAAAGAAGATGATGGTGATATCATTATAATCAATGGTGATGATGATCTTATTATGAGTGATCTTATTATGAGCAACGAAGAAGAGGGTGGTGTCACTATGTCTTGGCCTGAGCTTTTTGCACAGGAACTGTTAAAGAATAACAAAGGATGCTTGATCGAAGAAGATGTTTCGATGCTTTCCAATGATTTTTATAAGGACTTATTGTTCGAAAATAACAACAATATTAAGTAA 1035 0.3807 MALNSSARKDFTDDELLKPFLYNKIHNLPLPNYINILEQDLFGTVKNPWQIWEEFEASHSYSGKDLYVFSILRKKSATSTRVVRTIGMGTWEGEDTGKSIFAKDTNQLLGMKKRYRFEKSDTYQDGGWIVHEYSLDKSLISNPSAINYVLCRFRKNSKLGLQNTGTRIHHQPNSHIPNCSVVPRKNPKMNNVGQSQRKTVAVPPRAPVAVPPRAAATTIPENNSTWLGENIDQNPRNQLDSVNNKTEAVKITNETERKFNKEEHCAMNKEDDGDIIIINGDDDLIMSDLIMSNEEEGGVTMSWPELFAQELLKNNKGCLIEEDVSMLSNDFYKDLLFENNNNIK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1896 344 Pfam No apical meristem (NAM) protein 12 135 IPR003441 GO:0003677|GO:0006355
Tpr7g1896 344 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 12 261 - -
Tpr7g1896 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 261 - -
Tpr7g1896 344 Gene3D NAC domain 12 159 IPR036093 GO:0003677|GO:0006355
Tpr7g1896 344 ProSiteProfiles NAC domain profile. 3 156 IPR003441 GO:0003677|GO:0006355
Tpr7g1896 344 SUPERFAMILY NAC domain 12 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1896 Tpr-Chr7 22281732 22285579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1896 12 155 NAC Transcription Factor Family AT5G62380 33.333 2.56e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g1896 NAM 2.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1896 - - mtr:MTR_1g045470 313.538