Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1895 ATGGAAAGCAACAACGAAGAAGATGACGATTACATGGCTGACCTTTCTCGCTTTCTTCCTACCGATTCTATTATTGATCCTCCAAATCCAAAGTCTTCTTCAAAAAGGATTTCTGAAAAGAAAGATCCTTCAATAAACTCTTCCAAGAGCCATTTGAAAGCTCTTAACTGGCAAGAACGGCGAAAAATTGAAAGAGAAAGAAAGCAAATACAAGAGGATGAACAAACATTAGCAAAAATTGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAAATGGGTTATACACCAGGTTCTGCTCTTGGCAAGCAGGGCTCAGGCAGGGCTGAACCGGTGGGGATTGAAATTCGACGGTCACGAGCAGGTATAGGCTTAGAGGATCCCCACAAGGAGAAGATGAAAAGGGAGGAAATCACGATCAAACAGAAAAGGAAGAATGAGCAGGCTCTGATGGAAGAATTTGGGTCTAGGCAGAAATCACGGTGGCAAAGTAGGAGGATTATTGTTAATTTCAACAAGGCTAAGGCTGCCCTTGACCAATTGGAGAATCGGGATATTGTGGAGCCCCCGAAGAATGAGGATGATGCAGAGGGTGAAGATGGAGAAGAGGAGGAAGAAATAACAGAAGAGGGCTTGCTCGATGTTTTGATGAAACTAAGGGATGAGTTCAATTACTGTCTCTTCTGTGGATGCAAATATGAATCAAGTTCTACCCTTTTGGACAACTGCCCTGGAATCAATGAAGACGACCACTAA 768 0.4284 MESNNEEDDDYMADLSRFLPTDSIIDPPNPKSSSKRISEKKDPSINSSKSHLKALNWQERRKIERERKQIQEDEQTLAKIEAPIPQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGIGLEDPHKEKMKREEITIKQKRKNEQALMEEFGSRQKSRWQSRRIIVNFNKAKAALDQLENRDIVEPPKNEDDAEGEDGEEEEEITEEGLLDVLMKLRDEFNYCLFCGCKYESSSTLLDNCPGINEDDH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1895 255 PANTHER UNCHARACTERIZED 7 255 IPR039249 -
Tpr7g1895 255 Pfam G-patch domain 86 129 IPR000467 GO:0003676
Tpr7g1895 255 ProSiteProfiles G-patch domain profile. 86 132 IPR000467 GO:0003676
Tpr7g1895 255 MobiDBLite consensus disorder prediction 33 47 - -
Tpr7g1895 255 MobiDBLite consensus disorder prediction 185 212 - -
Tpr7g1895 255 SMART DUF4187_2 201 255 IPR025239 -
Tpr7g1895 255 MobiDBLite consensus disorder prediction 196 212 - -
Tpr7g1895 255 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 7 255 - -
Tpr7g1895 255 MobiDBLite consensus disorder prediction 1 60 - -
Tpr7g1895 255 Pfam Domain of unknown function (DUF4187) 203 255 IPR025239 -
Tpr7g1895 255 SMART G-patch_5 84 130 IPR000467 GO:0003676
Tpr7g1895 255 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1895 Tpr-Chr7 22278866 22281248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1895 78 128 C2H2 Transcription Factor Family AT5G26610 45.098 4.59e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1895 - - gmx:100806249 374.015