Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1885 ATGGCCGAATCATTACTGTTCAGTCTCGCTGAGTCATTCATCGGTAAGGTTGCTTCTCGTGCTGTTGAAGAAGCATCTCTTGCCTTTGGCGTCTACGACCATCTGCTAGATATAAAAAACAAGGCGTCACTCATCAAAGCTGTGCTCCTGGATGCCGAACAAAAGCAGCGGAAGAATCATTTGCTCCGTGAATGGCTGCAACAGATCAAGTGCGTCTTCAATGATGCTGAAGATGTAATCGATGATTTTGAGTGCGAGGCACTAAGAAAGCATGTTGTCAACACTTCAGGTAGCATTGGAAGAAAGGTACGTCGTTACTGCTCAAGTTCTAATCCTCTTGTTTATCGCCTTAAAATGGCTCATAAAATAAAAGATATTAAAGAGAGATTCATTGAGGTTGCTGCTGATAGACTTAATTTTGGCCTTCAAATCAATGAAAGTGATAATCGCGTTGTGCAAAGGCGGGAAATGACTCATTTCCATGTAAATGAGTCTAATGTGATAGGAAGGGAACATGACAAACAACAAATTATTGACCTCTTATTGCAAGATGATGGTGATAAAAGTCTCTCTGTTATTCCTATTGTTGGAATTGGAGGCTTGGGAAAGACTACCCTTGCAAAATGTGTATTTAATGATAAGAGTGTAGTTGACTCTTTTCCATTGAAGATGTGGGTATGTGTCTCTGATGATTTTGAACTTAAGCATTTGCTCATTAAAATCCTCAACTCTGCTAGTGCTTCTAATTCCAACCAAGAAAACTTTGATGTGGATCAACTACAAAGTCATCTAAGAAACAAACTTTTTGGTCAAAAGTTCTTGCTTGTCTTGGATGATGTATGGAATAAGGATCGTGCCAAATGGGAAGAATTGAAAGATATAATTCAAGGAGTCGCAGGTACTGAAGGAAGTAAAGTCTTAGTGACTACACGCAGCCACAATGTAGCTGATGTGATGCGTACCACCTCTCCTCACATTTTGAAAGACCTGTCCGAAAAAGATTCCTTATCTGTATTTGTCAAATGGGCTTTTAAAGATGGAGAAGCGGAAAAATATACAGAATTAGTGGAGATTGGAAAAGAAATTGTGCAAAAATGTGGAGGGCTTCCTTTGGCCTTAAGAACATTGGGGAGTTCATTGTTCAAAAAAGTTGATATAAAAGATTGGGAGTTTGTTAGGGACAATGAGATTTGGAATTTACCACAAAAAGAGGATGACATTTTGCCTGCTATCAAATTAAGTTATGATCAATTGCCTTCTTATTTAAAATCATGTTTTGCTTGTTTCTCCCTCTTTGAAAAGGACTTTGTTTTTTCTAATTTTCATGTTACTGAGTTATGGGCGGCACTTGGTTTTCTTCCATCACCAAAAAAGGGTCAAACAATAGATGACATTGTCAATCAACTTTTGCATGATCTAATGTCAATATCTTTTCTTCAAGATTTTGTTGACTTTGGTAATAATGCTTGCATCTTTAAATTGCATGATTTGGTGCATGATCTTGCATTATATGTCGCAAAAGATGAATTTCAATTGGTGAAATTGCATAACAAAAAAATATTTGAGAATGTTCTCCATTTGTCATTTATTGAAAATGATCTTCTTGGCCAAACATCAGTTCCAACTCGATTGAGAACAATACTTTTTCCTATAGGAGCCAACAACAAAGCTTTCTTGTATACTTTGGTGTCAAGGTGTAAATTCTTGCGGATTTTGCAAATAACTAATTCTACATATGTGAGTTTACCCCAGTCAATTGGTAAATTAAAACATTTGAGATGTCTCAATCTTGAGTTTAATAAAGAATTGAAGAGTCTTCCGAATTCAGTGTGCAAACTTCAGAATCTCCACATTTTGAAACTCAATGGATGCACAAATCTTCAAACATTACCTAATGGAATAGGAAACTTGATCAGCCTTCGACAATTACATATAACCACAATGCAATCTAATTTTCCAGACAAAGAGATTGCAAAATTGACTTCTCTAGAATTTATATCTGTCAGTTCTTGTGATTATTTGGAGTCATTGTTTGAAGGTATACAACTTCCGAATCTTAAAATGTTGATGGTTATTTCTTGTGGGAATCTAAAATCTTTGCCATTTCATGCTATTCCAAACTTAGAGAGTTTGGGGATTGATAGTTGCAATAAGATAAAATTTTCATTGAACCATGAATATGACATCTCCAATTTAAAGCTGAAGCTCCTAGGTCTAGGATCTTTACCTCAATTAGTGAGTTTTCCCCAATGGTTGCAAGGATGTGTGACCACATTACAATCATTGGAACTTTGTAATTGTTGCAATCTTGAAGAGCTTCCTGAGTGGCTGTCAACTCTAATATGTCTAAAAGCAATTGAAATTCTTGAGTGTCCGAAATTGGTTTCCCTCCCCGATAACCTGCATCAACTCAAAAACCTTGAATATTTGTATATTGAAGGTTGTGATGAATTATGCAGAAGATATCATCCAAAAGTAGGAAAGGATTGGCACAAGATTTCACATATCAAACAAGTCATCATTAAATCACCAGAACTAGAAGATTAA 2547 0.3612 MAESLLFSLAESFIGKVASRAVEEASLAFGVYDHLLDIKNKASLIKAVLLDAEQKQRKNHLLREWLQQIKCVFNDAEDVIDDFECEALRKHVVNTSGSIGRKVRRYCSSSNPLVYRLKMAHKIKDIKERFIEVAADRLNFGLQINESDNRVVQRREMTHFHVNESNVIGREHDKQQIIDLLLQDDGDKSLSVIPIVGIGGLGKTTLAKCVFNDKSVVDSFPLKMWVCVSDDFELKHLLIKILNSASASNSNQENFDVDQLQSHLRNKLFGQKFLLVLDDVWNKDRAKWEELKDIIQGVAGTEGSKVLVTTRSHNVADVMRTTSPHILKDLSEKDSLSVFVKWAFKDGEAEKYTELVEIGKEIVQKCGGLPLALRTLGSSLFKKVDIKDWEFVRDNEIWNLPQKEDDILPAIKLSYDQLPSYLKSCFACFSLFEKDFVFSNFHVTELWAALGFLPSPKKGQTIDDIVNQLLHDLMSISFLQDFVDFGNNACIFKLHDLVHDLALYVAKDEFQLVKLHNKKIFENVLHLSFIENDLLGQTSVPTRLRTILFPIGANNKAFLYTLVSRCKFLRILQITNSTYVSLPQSIGKLKHLRCLNLEFNKELKSLPNSVCKLQNLHILKLNGCTNLQTLPNGIGNLISLRQLHITTMQSNFPDKEIAKLTSLEFISVSSCDYLESLFEGIQLPNLKMLMVISCGNLKSLPFHAIPNLESLGIDSCNKIKFSLNHEYDISNLKLKLLGLGSLPQLVSFPQWLQGCVTTLQSLELCNCCNLEELPEWLSTLICLKAIEILECPKLVSLPDNLHQLKNLEYLYIEGCDELCRRYHPKVGKDWHKISHIKQVIIKSPELED* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1885 848 Gene3D - 149 326 IPR027417 -
Tpr7g1885 848 Gene3D - 10 124 - -
Tpr7g1885 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 428 IPR027417 -
Tpr7g1885 848 CDD RX-CC_like 12 134 IPR038005 -
Tpr7g1885 848 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 7 725 - -
Tpr7g1885 848 Gene3D - 329 419 IPR042197 -
Tpr7g1885 848 SUPERFAMILY L domain-like 493 830 - -
Tpr7g1885 848 PRINTS Disease resistance protein signature 192 207 - -
Tpr7g1885 848 PRINTS Disease resistance protein signature 267 281 - -
Tpr7g1885 848 PRINTS Disease resistance protein signature 366 380 - -
Tpr7g1885 848 PRINTS Disease resistance protein signature 611 627 - -
Tpr7g1885 848 Gene3D Ribonuclease Inhibitor 543 847 IPR032675 -
Tpr7g1885 848 Pfam NB-ARC domain 171 416 IPR002182 GO:0043531
Tpr7g1885 848 PANTHER DISEASE RESISTANCE PROTEIN RP 7 725 IPR044974 GO:0006952
Tpr7g1885 848 Pfam Rx N-terminal domain 11 97 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1885 Tpr-Chr7 22130170 22133212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1885 193 818 WRKY Transcription Factor Family AT5G45050 23.704 6.52e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1885 - - mtr:MTR_7g078640 1097.8