Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1863 ATGGAGCAAACCACACTCGAATCCATTCAATTCAACGAAGAAATTCAAGGAATCATGGCTCCGGCATCGGAAACCGCGAACTCTTTCACTGCACTTCTCGAACTACCTCCGACGCAGGTCGTTGAGCTTCTTCACTCACCGGAGATTACCGGAAAACCTCCGAAACCCTATCCTCTAACTTGCGACACCGGTAATTTGACTTTCCCTTCCAACACCACCGCAAGATTCTCCGTACTCGCCGGAGAGAATAAGAACTCGCCGGAGGTGAAGGATGAGGTACCGGAGACTGAAGGAGGTGGTTGTGTCTCTGATCCAACAATCGAGAACAAGAAATCCAAAGGTGCGAAGAGGAAAGAGCGAGAGAAGAAGGTTAAAGTGTCGTCTAAGAAAATCAAAAGTATCGGCGATGAGAATTCCGGCAACGGCGGCGATGAACTTCCGTACGTTCACGTTCGAGTTCGTCGAGGTCAAGCTACAGATAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGAATGAAACTGTTGCAAGAGTTGGTCCCCGGTTGCAACAAGATATCAGGAACAGCATTGGTTTTGGATAAAATCATCAACCATGTGCAATCTCTTCAGCATGAAGTGGAGATTTTATCAATGAAACTAGCAGCAGTTAACCCAATAATTGATTCCAACCTTGAAAGCATATTGGCTACAGAAGGTTTGTCTCTCATGGACAGTAACTTCCCTGCCACAGTTGCACCCGTCGTGTGGCCGGAAACCCCACACAATGGAAACAGACAGCAATTTCAGATACCGTGGCAATCTGATGCATTCCACCAACCACTTTGGGGGAGGGGAGAAAACAACCCTAATTTCATGACCCCAGAAAACTCACTTTTGAGTTACGACTCATCGGCAAATTCAGTTTCTCTGCACTCAAATCAGATGAAGATGGAGCAATGA 954 0.4675 MEQTTLESIQFNEEIQGIMAPASETANSFTALLELPPTQVVELLHSPEITGKPPKPYPLTCDTGNLTFPSNTTARFSVLAGENKNSPEVKDEVPETEGGGCVSDPTIENKKSKGAKRKEREKKVKVSSKKIKSIGDENSGNGGDELPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVEILSMKLAAVNPIIDSNLESILATEGLSLMDSNFPATVAPVVWPETPHNGNRQQFQIPWQSDAFHQPLWGRGENNPNFMTPENSLLSYDSSANSVSLHSNQMKMEQ* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1863 317 Pfam Helix-loop-helix DNA-binding domain 161 208 IPR011598 GO:0046983
Tpr7g1863 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 207 IPR011598 GO:0046983
Tpr7g1863 317 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 316 IPR024097 GO:0006355
Tpr7g1863 317 SMART finulus 163 213 IPR011598 GO:0046983
Tpr7g1863 317 MobiDBLite consensus disorder prediction 83 145 - -
Tpr7g1863 317 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 316 - -
Tpr7g1863 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 224 IPR036638 GO:0046983
Tpr7g1863 317 Gene3D - 154 227 IPR036638 GO:0046983
Tpr7g1863 317 CDD bHLH_AtBPE_like 147 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1863 Tpr-Chr7 21851983 21857346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1863 2 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 47.709 1.11e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g1863 HLH 3.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1863 - - aprc:113872810 464.151