Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1852 ATGGGTAAGACGAAGAAGAAGAGAAGTAGGGTTTCCGTTTCCGACGACGATGATGAAGAAATCCGATCTGATAATATCAATAACGACGATTCCGATCAAAACCAAAACTCTCTCTACCAGGTTCTTGGTGTGGACAAAACAGCATCTCAACAAGAAATTAAGAAAGCATATCACAAATTAGCGTTGAGACTTCATCCTGATAAGAATCCTGGTGATGAGGAAGCTAAAGCCAAGTTTCAACAACTGCAAAGTGTTATCTCAATTCTTGGAGATGAACAAAAGCGGGCAGTGTATGATCAGACTGGTTCTGTTGATTGTGCTGACCTTGGAGGAGATGTTGTCCAGAATCTTCATGAATATTTCAGAACAATGTACAAGAAGGTTACTGAAGCTGATATTGAAGACTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTAATCTTTACAAGGAATGCAAGGGTAATATGAAGAGGTTATTTTGTTCAATGCTTTGTTCGGATGCTAAACTCGACTCACATCGGTTCAAGGATATTATTGATGAGGCTATAGCTTCTGGAGAACTAAAGGAAAAGAAAGCCTACAAGAAATGGGCAAAGAAAATTTCCGAAACCAAGCCACCAACTAGTCCTTTAAGGAGGAAAAAAGCAAATAAGGAACCAAAAACGGATTTGTATGCTATCATATCAAAACGACGAGATGAGAGGAAAGATCGGTTTGATTCTATGTTCTCATCTCTAATTTCAAAATATGGTGGAGGCCATGTGCCAGAACCCTCTGAAGAGGAGTTTGAAGCGGCACAAAAAAAGATGGAAAGCCGAAGATCCTCAAAAAAGCCAAGGCGAAAGTAA 864 0.3924 MGKTKKKRSRVSVSDDDDEEIRSDNINNDDSDQNQNSLYQVLGVDKTASQQEIKKAYHKLALRLHPDKNPGDEEAKAKFQQLQSVISILGDEQKRAVYDQTGSVDCADLGGDVVQNLHEYFRTMYKKVTEADIEDFEANYRGSDSEKNDLINLYKECKGNMKRLFCSMLCSDAKLDSHRFKDIIDEAIASGELKEKKAYKKWAKKISETKPPTSPLRRKKANKEPKTDLYAIISKRRDERKDRFDSMFSSLISKYGGGHVPEPSEEEFEAAQKKMESRRSSKKPRRK* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1852 287 MobiDBLite consensus disorder prediction 255 287 - -
Tpr7g1852 287 Pfam DnaJ domain 38 99 IPR001623 -
Tpr7g1852 287 SUPERFAMILY Chaperone J-domain 36 112 IPR036869 -
Tpr7g1852 287 MobiDBLite consensus disorder prediction 1 37 - -
Tpr7g1852 287 CDD DnaJ 39 91 IPR001623 -
Tpr7g1852 287 MobiDBLite consensus disorder prediction 260 277 - -
Tpr7g1852 287 Gene3D DnaJ domain 21 111 IPR036869 -
Tpr7g1852 287 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 287 IPR042977 -
Tpr7g1852 287 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Tpr7g1852 287 SMART dnaj_3 36 94 IPR001623 -
Tpr7g1852 287 MobiDBLite consensus disorder prediction 205 232 - -
Tpr7g1852 287 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 1 287 - -
Tpr7g1852 287 PRINTS DnaJ domain signature 39 57 IPR001623 -
Tpr7g1852 287 PRINTS DnaJ domain signature 57 72 IPR001623 -
Tpr7g1852 287 PRINTS DnaJ domain signature 74 94 IPR001623 -
Tpr7g1852 287 PRINTS DnaJ domain signature 94 113 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1852 Tpr-Chr7 21747162 21751074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1852 39 99 C2H2 Transcription Factor Family AT1G74250 42.424 2.36e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1852 K09529 - gmx:100781463 409.838