Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1835 ATGACTGCTGATGAAATTCGTGGTATGGATTTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCACCGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAGGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAGATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGCAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACCAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACGGAGACGTATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGAGAGGCTATAAAAGAGGTTTTCCCCGATTCGACTCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTCTGAAGGGATTTAAAAAAGCCATGTTCTCAAATTTTTCAAAGGATGATTTTGAAGAGTATTGGTCAGAGATGATTAAAGAAAATGGAGTTGAAGGACATCCGTGGGTTATCAAAACCTACGAGAACAAGTTACTATGGGCAACTGCATACCTGCGGGATAAGTTTTTTGGACGTATAAGAACTACGTCCCAATGTGAAGCAATCAATGCAATAATAAAGAGTTATGTCAGAAAGAAAGGATGCATCTTTGAATTTATGCAAAATTTTGAGCAGGCTCTAAGAGGCTACAGAAACAATGAACTTGTTGAAGATTTTAAGTCAAAGTTTTCAGAACCTGTGTTGACAACTCAACTACGTTTGATTGAGAGCAATGCCGCTAAAATCTATACAGCGGAGATTTTCAAAGAAGTGAAAGAAGAAATTATGAAGGCCGGTGAATTGATTGTTAAGCATAAAAAGGAAATTGGAGATACAAAGTTTTATACTTTGACTAAATATTGTCGGGATGCGTATGAAAGAACAGTTGTTTACGATGGTGATACATTCCAATGTTCGTGCAGGTTGTTTGATTCTCGTGGACTTCCTTGTTCTCATATTTTTCATGTGATGAAGGAAGAACATGTTGATCACATTCCTAGCACTTTGGTATTGTCGCGATGGACCAAGGATGCTAAAATTGATTATTTGAACATGGTGGATGTTAATGATCCAGTTGATTCCGATGTGATTGAGCTTGCCCGTTTTGGTGCATATTGTTCTTGTTGA 1785 0.386 MTADEIRGMDFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDSTHRLCAWHLNKNAGENVKNSGFLKGFKKAMFSNFSKDDFEEYWSEMIKENGVEGHPWVIKTYENKLLWATAYLRDKFFGRIRTTSQCEAINAIIKSYVRKKGCIFEFMQNFEQALRGYRNNELVEDFKSKFSEPVLTTQLRLIESNAAKIYTAEIFKEVKEEIMKAGELIVKHKKEIGDTKFYTLTKYCRDAYERTVVYDGDTFQCSCRLFDSRGLPCSHIFHVMKEEHVDHIPSTLVLSRWTKDAKIDYLNMVDVNDPVDSDVIELARFGAYCSC* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1835 594 ProSiteProfiles Zinc finger SWIM-type profile. 511 547 IPR007527 GO:0008270
Tpr7g1835 594 PANTHER OS02G0262500 PROTEIN 7 581 - -
Tpr7g1835 594 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 581 IPR031052 GO:0006355
Tpr7g1835 594 Pfam FAR1 DNA-binding domain 19 113 IPR004330 -
Tpr7g1835 594 Pfam MULE transposase domain 236 330 IPR018289 -
Tpr7g1835 594 SMART 26again6 522 549 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1835 Tpr-Chr7 21428041 21429920 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g1835 FAR1 7.6e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1835 - - ccaj:109792835 795.423