Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1828 ATGGAAAATCTATGCGGTTTGTTCAAGAATAAAAAACGAAAGGACTGGCCTGAGAAGATAAACAACAACATTAATACCAATAAATTGGTGGTGTTAAAAGATCCCACGGGCCGAGAGATTGGGATACGATACAAATTAGGAACGGAAATATGGAGAAGTGAATCCGGAATAACATACCATTGCAATGACAGACAAACAGGAGAACAATTTTCTTACAAGTGGATTTACAAGAAGAATAAGCTTAGAACTGCGTTTGATATTGAAAATTTGAGAAGAGAAGTTGAAATCATGAGGCATTTACCTGATCACCCTAACATTGTTTCGTTGAAGGATACTTATGAAGACGACCATCATGTTCATCTTGTTATGGAACTCTGTCAAGGTGGTAACCTTCTCGATCGCATCATCGGTAGAGGATACTACACAGAACGCTCTGCAGCGTCTGTCGTCAAAAGCATCGTCGAAGTTGTTCAGATGTGCCATGAACATGGTGTGATGTATCGAAATCTCAAACTCGAAAATTGTTTGTTTGCAAACAAAATGGATAGAGGACCTTTGAAAGTTACTGACTTTCGTTTGTCAATTTTCTTTAAACCAGGTGAAAGATTGAATCAGATAGTTGGAAACCTATACTACATGGCCCCTGAAGTATTAAAGAGAAATTATGGCTCTGAAATTGATATCTGGAGTGCTGGTGTCATTCTTTACATCTTACTCTGTGGTTTCCCACCGTTTTGGGCAGAAACTGAGCAGGGAGTTTCTCAAGCAATTATACGATCTAAGATTGACTTTAATAGGGAGCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTTAAAAAGATGCTTGATCCTGACCCAAAGCGCCGATTTACTGCACAGGAAGTGTTAGATCATCCATGGTTGCAGAATGCAAAGACAGTTTCTAAGGTTTCATTGGGAGAAACAGTCAGAGCAAAGCTCCTGCAGTTTTCTATAATGAACCAACTTACGAAAACAACATCTATGGTGATTCTAAAACATTTGACTACAATAGAAAAAGTTATAGAAAGAGAAATATCCTGGGTGAGGGATACAGGAGTTAAATTCAGCAAGATTGACGACCATGAAGTACGAGTAAGGTTGCATAAGCTAGCCCAACAAATTCCTCATGTAGATGAGCAAAGACTTATGAACGCTTGCGACGAAAATGGTTACCTTGATTATGGAGAGTTTTTAGCCATTTCTGATCATCTGAGAAAGATGTCTCATGAAGAACACGTCGATATAGCATTTCAATATTTTGATAAAATGCAATCCGGGTATATTGAACTTGAGGAGTTACATAAGGCCATAGCTAAAACTGATAAGAGTGACACAGAGAGTCAAAAGGTCATTACGGCAATTATGCATGATGTGGCCACAAATAAGGATGGAAGAATTAGTTATGAGGAAATTACAAATCGGAGTTTGAAACTGATGAAGGAGTGGTCATCAGAATTGATCTATGAGGATAGACATGACTTTTGA 1512 0.3836 MENLCGLFKNKKRKDWPEKINNNINTNKLVVLKDPTGREIGIRYKLGTEIWRSESGITYHCNDRQTGEQFSYKWIYKKNKLRTAFDIENLRREVEIMRHLPDHPNIVSLKDTYEDDHHVHLVMELCQGGNLLDRIIGRGYYTERSAASVVKSIVEVVQMCHEHGVMYRNLKLENCLFANKMDRGPLKVTDFRLSIFFKPGERLNQIVGNLYYMAPEVLKRNYGSEIDIWSAGVILYILLCGFPPFWAETEQGVSQAIIRSKIDFNREPWPKVSDNAKDLVKKMLDPDPKRRFTAQEVLDHPWLQNAKTVSKVSLGETVRAKLLQFSIMNQLTKTTSMVILKHLTTIEKVIEREISWVRDTGVKFSKIDDHEVRVRLHKLAQQIPHVDEQRLMNACDENGYLDYGEFLAISDHLRKMSHEEHVDIAFQYFDKMQSGYIELEELHKAIAKTDKSDTESQKVITAIMHDVATNKDGRISYEEITNRSLKLMKEWSSELIYEDRHDF* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1828 503 CDD EFh 425 489 IPR002048 GO:0005509
Tpr7g1828 503 Gene3D - 344 411 - -
Tpr7g1828 503 ProSiteProfiles EF-hand calcium-binding domain profile. 417 452 IPR002048 GO:0005509
Tpr7g1828 503 Pfam EF-hand domain pair 424 480 IPR002048 GO:0005509
Tpr7g1828 503 Gene3D Transferase(Phosphotransferase) domain 1 131 314 - -
Tpr7g1828 503 Gene3D - 320 479 - -
Tpr7g1828 503 ProSiteProfiles Protein kinase domain profile. 44 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1828 503 CDD STKc_CAMK 43 302 - -
Tpr7g1828 503 Gene3D Phosphorylase Kinase; domain 1 46 130 - -
Tpr7g1828 503 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 494 - -
Tpr7g1828 503 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 8 19 494 - -
Tpr7g1828 503 SUPERFAMILY EF-hand 366 482 IPR011992 -
Tpr7g1828 503 SUPERFAMILY Protein kinase-like (PK-like) 43 328 IPR011009 -
Tpr7g1828 503 Pfam Protein kinase domain 52 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1828 Tpr-Chr7 21271118 21275872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1828 1 491 EF-hand Containing Proteins AT2G41860 58.449 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr7g1828 Pkinase 5.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1828 K13412 - gmx:100815320 605.905