Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1824 ATGGGAACTCCAGAATTTCCAGATCTTGGAAAACACTGTGCTTTCTCCGATTGCAAACTCATTGATTTCTTGCCCTTCACTTGCGATCGTTGCAACCAGGTGTATTGTTTGGAACACCGAAGTTATATCAAACACCACTGTACAAAAGCTGACAAGCAAGATGTCACTGTAGTAATATGTCCACTTTGTGCCAAAGGGGTTCGCCTAGTTCCTGAGCAAGATCCAAACATAACATGGGAGAATCATGTTAACACCGACTGCGACCCATCAAATTATGAAAAAGTTACAAAGAAGAAAAAGTGCCCTGCAGCTGGATGTAAAGAGATCTTAGTATTCTCAAACACAATTAAGTGCAGGGATTGCATGGTAGACCATTGTTTGAAGCATAGATTTGGACCTGATCACAAATGTCCAGGACCTAAAAAATTGGAATCAAATTTCTCATTTATGAGTCTAATGAATAGGAATAGAAAACCGGAGTCTAAAAAAATCAATTCAAGTTCAACACCCTCCTCATCTAAGTGGACAAAGAGCTTTCTTAATGCCGCGTCTAGTATTCGAGCTTCAGCTGAGGCTGGAATATCAAAGTTGAGTGGTGAAATTAACCAAGCATGGGGGACATCAAGTGATGGTGGAGGCAAGAGCAATAGCAGTGGTCAAGTGGAGCAATGCCCTCAATGTGATGCTAAGTTTTCCTCGGTCACTGCATTGGTGGATCATGTACAGAAAGTTCATGAAAGAAGCGGTAATCGATCTGCTGCAAAAGTTACAATTGATGCGTGTCCTAAGTGTAGTAAAGGATTCAGAGACCCTGTGTCCCTTGTGGAGCATGTTGAGAGAGAGCACGGCGGCAGTTCGAGCGCATAG 867 0.4256 MGTPEFPDLGKHCAFSDCKLIDFLPFTCDRCNQVYCLEHRSYIKHHCTKADKQDVTVVICPLCAKGVRLVPEQDPNITWENHVNTDCDPSNYEKVTKKKKCPAAGCKEILVFSNTIKCRDCMVDHCLKHRFGPDHKCPGPKKLESNFSFMSLMNRNRKPESKKINSSSTPSSSKWTKSFLNAASSIRASAEAGISKLSGEINQAWGTSSDGGGKSNSSGQVEQCPQCDAKFSSVTALVDHVQKVHERSGNRSAAKVTIDACPKCSKGFRDPVSLVEHVEREHGGSSSA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1824 288 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Tpr7g1824 288 PANTHER ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 1 287 - -
Tpr7g1824 288 SMART c2h2final6 222 245 IPR013087 -
Tpr7g1824 288 SMART c2h2final6 259 282 IPR013087 -
Tpr7g1824 288 Pfam AN1-like Zinc finger 101 141 IPR000058 GO:0008270
Tpr7g1824 288 Pfam AN1-like Zinc finger 13 52 IPR000058 GO:0008270
Tpr7g1824 288 ProSitePatterns Zinc finger C2H2 type domain signature. 261 282 IPR013087 -
Tpr7g1824 288 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Tpr7g1824 288 SUPERFAMILY beta-beta-alpha zinc fingers 223 278 IPR036236 -
Tpr7g1824 288 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Tpr7g1824 288 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Tpr7g1824 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 259 287 IPR013087 -
Tpr7g1824 288 Gene3D - 81 154 IPR035896 -
Tpr7g1824 288 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 1 287 - -
Tpr7g1824 288 SUPERFAMILY AN1-like Zinc finger 4 59 IPR035896 -
Tpr7g1824 288 Gene3D Classic Zinc Finger 200 285 - -
Tpr7g1824 288 Pfam C2H2-type zinc finger 223 245 - -
Tpr7g1824 288 ProSitePatterns Zinc finger C2H2 type domain signature. 224 245 IPR013087 -
Tpr7g1824 288 Gene3D - 2 60 IPR035896 -
Tpr7g1824 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 222 250 IPR013087 -
Tpr7g1824 288 SUPERFAMILY AN1-like Zinc finger 93 146 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1824 Tpr-Chr7 21172205 21174885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1824 1 288 C2H2 Transcription Factor Family AT2G41835 62.153 4.24e-126 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g1824 zf-AN1 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1824 - - gmx:100786272 496.508