Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1802 ATGAGAAAATTAAGAAAAGTGAAGTTTAAAATAAAAGGGCAAAGTCGCAAACCCTACGCAGCCACGCCTTCAGTTGTTCCGCCGTTTCTCTTAAACTCGGGTTCACTTCTCTGTATTATACTCTCGTTTAACATGGAGTTCAACATGCCCCAGTTAGCGGTACCAAGGATCTACACTGGTCCAGTAGCCGGTGTCAAAGTGTTGGTTGTGGATGCTAACTCAGCATGCCGAGCAGTTATATCAAAATCGCTTCTTTCACTTGGATATGAGGTTGCAACTGCTACACTAGCTTCCGAGGCTTTATCCATTATCGGAGAGAAAAAGAATGAAATCAATCTCGTGCTTGTGGAGGCTCAGTTGCCTGACATGGAAATATATGAGCTTGTAGCGAAAATGAAAAGCTCTAATATTCCATCTTTCATTATGACTTCTTATGATGATGACATTCTGTCCATTACACAAGCGCTACATATAGGAGCTAAATGGTCTTTTAGAAAACCGGTTCGGATTTCTGATCTACAACAGCTGTGGCGATTCGCAGTGTGGAACCGGTTTGAACGAGCATTCTGCGAAGAAGTATTTTACTATTGGTGGCCAGAAGTGGTTACGAATGGTAAAGCACAAGAATCTTTTGATAATAAAGATACTATAGTACTCCTGAAAACCAGAAGGCGTACCTGGACTGATGATTTACATAGGAAGTTCTTGGATGCTGTTCAAACAGCAGGAATAAACGCTCCACCGAAGACAATATTCGAGCTTATGGATGTGGAAGGACTTAAGAAAGAGAGTGTTAGAAACTATTTAAAGAAATATCGTCAATCTATGAATCTACATGCTAGTCCAATGGGACAGCATGTGAATGGAGATGTGTCTCTGACTAAGAAAAGTCGAGGAAAACGCTCTCTATCCTTAGGGAGTCAAGGTGTTACCGACAATCCAGCTTTCAATCAGAAGGATCTAAGTAATTTTGTACCTGCATCTGAAATAATCAGCCAGGTTGTAAATACTGCTGATGGAAAAGTTTCTAACGCAGGACAACAATTGAATTTTTCAACCCTGCTGGCCTTTAACATGTCCGATCAATTTTTCCCAGCACTTCCTATTGCTCTACTACCAATAGAAAAAAATGAAAAGATTGATGAAGTTTATAATGCAAAAGAAAGTCAGATGTTTACTGATGAGGATTTGAAAATGTGGTTGTCGACAATTTCAGACAATGTGACTCAAGATGCTGTTGCTTGA 1245 0.4008 MRKLRKVKFKIKGQSRKPYAATPSVVPPFLLNSGSLLCIILSFNMEFNMPQLAVPRIYTGPVAGVKVLVVDANSACRAVISKSLLSLGYEVATATLASEALSIIGEKKNEINLVLVEAQLPDMEIYELVAKMKSSNIPSFIMTSYDDDILSITQALHIGAKWSFRKPVRISDLQQLWRFAVWNRFERAFCEEVFYYWWPEVVTNGKAQESFDNKDTIVLLKTRRRTWTDDLHRKFLDAVQTAGINAPPKTIFELMDVEGLKKESVRNYLKKYRQSMNLHASPMGQHVNGDVSLTKKSRGKRSLSLGSQGVTDNPAFNQKDLSNFVPASEIISQVVNTADGKVSNAGQQLNFSTLLAFNMSDQFFPALPIALLPIEKNEKIDEVYNAKESQMFTDEDLKMWLSTISDNVTQDAVA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1802 414 SUPERFAMILY Homeodomain-like 220 276 IPR009057 -
Tpr7g1802 414 SMART REC_2 65 177 IPR001789 GO:0000160
Tpr7g1802 414 Gene3D - 65 188 - -
Tpr7g1802 414 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 212 277 - -
Tpr7g1802 414 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 64 183 - -
Tpr7g1802 414 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 223 274 IPR006447 GO:0003677
Tpr7g1802 414 Pfam Response regulator receiver domain 67 175 IPR001789 GO:0000160
Tpr7g1802 414 PANTHER TWO-COMPONENT RESPONSE REGULATOR 212 277 IPR045279 GO:0009736
Tpr7g1802 414 PANTHER TWO-COMPONENT RESPONSE REGULATOR 64 183 IPR045279 GO:0009736
Tpr7g1802 414 SUPERFAMILY CheY-like 64 182 IPR011006 -
Tpr7g1802 414 Gene3D - 222 277 - -
Tpr7g1802 414 ProSiteProfiles Response regulatory domain profile. 66 181 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1802 Tpr-Chr7 20979143 20986785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1802 64 273 Response Regulator Gene Family AT4G31920 30.000 9.32e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g1802 Response_reg 2e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1802 - - mtr:MTR_8g032710 354.755