Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1788 ATGGATAATCATGGGTCTTCACCACCACCATATGGATATCGAAACCCTTATGGATACCCTCCATATCCATATCCACCTCCACCTCCACAACAATCTCAAGGTCCTTCTGATCAATATCCATATCCATATCCACCTGCAACTACTAATCCTTATTCATATGAATCATCATATCCACCAAATCCTTCACATTCCACAAACTACTCATACTCTTATCCACCACCACCTCCAACAAACCCTTTAGAGTATCAAACTCATCAACCATCAAATGCTTATCCTTATCCTTACCCTAACCCTTACCCTCAGCATTACCAATACCCTCCAATTAATGATGAATCTAACCCTCCTCATAGTTCTGCTAATTACCCTCCTTTGAATGATCTTATGAGCAATGTTCAGATATCTGATAACACGCCAAGTGCACCGCTGGCACGTGCACAGCCAGTGCGTGTAATGGCACTTTCTCCAGTAATAACACATTCCTATTCAGCTATAAATGAAGAGAAGAAAGAAGAGTTTCATGGTCATGCTAGTCATAATTCCTTTTCAGGTTTTGAACATTCTTATTCTGGTTTGGGGGATTCGCCAAGCTTTTCGGATTATTCTGGTGGTTCATTTGATGATTCAGTTCACAACCAAAGTTTGCAGCTTGTTCCGGTTCCGGGTAAAGGGTCGTTGAAAGTTTTGCTCTTGCATGGTAATTTAGATATATGGGTTCATGGAGCTAAGAATCTTCCAAATATGGACAAGTTTCATAAAACTTTAGGTGATGTGTTTGGTAAGGGATCAATGAGTAGTAAGATTACTAGTGATCCTTATGTGACGATTTCTTTGTCAAATGCTGTAGTTGGTAGGACATTTGTTATTAGTAATAGTGAAAATCCTGTTTGGGAGCAGCATTTTTTTGTTCCTGTTGCACATCATGCTGCTGAAGTGCATTTTGTTGTTAAGGATAGTGATGTGGTAGGTTCACAGCTTATTGGTGTTGTGACGATTCCGGTCGAACAATTATACTCAGGTGAAAAAGTACAAGGGACTTACCCTATTCTCAATAGCAACGGGAAGCCTTGTAAGCAAGGTGCTGTTTTGAGTGTTTCCATTCAGTTCATTCCAATAGAGAAACTGGTCATGTATCATCAAGGCGTTGGAGCAGGGCCGGAGTATATTGGTGTGCCGGGAACATATTTTCCATTGAGGAAAGGTGGAATTGTTACTCTATATCAAGACGCTCATGTTCCGGAAGGAAGTCTCCCTAATGTCATGCTTGATCATGGCATGCATTATGTTCACGGACAGTGTTGGCGTGATATCTTTGAGGCCATACGTCAGGCGAAGCGTTTGGTTTACATTACTGGGTGGGCAGTGTGGCACAAAGTTAGGTTGATAAGGGACCCTGATAGTCATAGTCATGCTTCAGAATACACACTTGGTGATCTTCTGAGGTCTAAGTCTCAGGAAGGAGTAAGAGTGCTTCTTCTTGTATGGGATGACCCTACCTCAAGAAGCATTCTTGGTTATAAAACAGATGGTGTCATGGCAACGCATGATGAGGAAACTCGACGATTTTTCAAGCATTCTTCTGTACAAGTGCTACTTTGTCCTCGCATGGCTGGAAAACGACATAGCTGGGCTAAACAACAGGAAGTTGGAACAATATATACACATCATCAGAAGACTGTAATTGTAGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCCTTTGTCGGTGGACTTGATTTATGTGACGGCCGATATGATACTCCCCATCATCCGCTCTTTAGGACACTGAAGACACTGCATAAGGATGACTATCATAATCCTACTTTTACGGGTAATACCAGTGGCTGTCCGCGGGAACCATGGCACGACTTGCATTCTAAAATTGATAGTCCAGCAGCTTACGATGTTTTGACAAACTTTGAGGAACGCTGGTTAAGAGCTGCAAAACCTAAAGGGATAAAAAAGTTGAAGAGTTCATATGATGATGCTTTGCTTAAAATAGAAAGAATTCCAGATATTCTCCGTGTAACAGACATTCCAAGTGTCGGTGATGATAATCCTGCATCTTGGCATACTCAGATATTTCGTTCAATTGATTCAAACTCTGTCAAGGGATTTCCAAAGGAGCCAAAAGATGCATCGCAACAGAACCTAGTATGCGGGAAAAATGTGTTGATTGACATGAGCATACATACAGCATATGTAAAGGCTATCCGCGCTGCTCAACATTACATTTATATAGAGAATCAATATTTCATTGGTTCCTCGTACAATTGGAACCAACATAAAGACCTTGGTGCTAATAATTTGATTCCGATGGAAATTGCGCTGAAGATTGCTGAAAAAATAAAAGCAAATGAGAGGTTTGCAGTATACATAGTTATTCCAATGTGGCCTGAGGGTGTTCCAACAGGAGCTGCCACTCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAATTTATAACGCTTTGGTTGAAGTTGGGCTCGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGAGAAGCCGTAGACATTCATGAGAATATTACTGTATCTGGAATTCCTCCCCCACCAAATACTCCACAAGCAAATAGTCGAAATAGCCGGCGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCAGCAAACATCAATCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTGAATATACATGGGCAAGAAAACAGTTTTATCCACGTGGACAGGTTCATGGATACAGGATGTCTCTTTGGGCAGAACATACGGGCACAATCGAAGACTGTTTCTTACAACCAGAGAGCTTGGAATGTGTGAGAAGGGTTCGAACAATGTCCGAAATGAACTGGAAACAATTTGCATCAAACGACGTGACAGAGATGGGAGGGCATTTACTAAAGTACCCTGTTGAAGTATCAAGAAAGGGTAAGGTTAAACCTCTTCCTGGTCATGAAGAGTTTCCTGATGTTGGAGGGAAGATAGTAGGATCATTTATTGCCATTCAGGAAAATCTAACCATTTGA 3120 0.4112 MDNHGSSPPPYGYRNPYGYPPYPYPPPPPQQSQGPSDQYPYPYPPATTNPYSYESSYPPNPSHSTNYSYSYPPPPPTNPLEYQTHQPSNAYPYPYPNPYPQHYQYPPINDESNPPHSSANYPPLNDLMSNVQISDNTPSAPLARAQPVRVMALSPVITHSYSAINEEKKEEFHGHASHNSFSGFEHSYSGLGDSPSFSDYSGGSFDDSVHNQSLQLVPVPGKGSLKVLLLHGNLDIWVHGAKNLPNMDKFHKTLGDVFGKGSMSSKITSDPYVTISLSNAVVGRTFVISNSENPVWEQHFFVPVAHHAAEVHFVVKDSDVVGSQLIGVVTIPVEQLYSGEKVQGTYPILNSNGKPCKQGAVLSVSIQFIPIEKLVMYHQGVGAGPEYIGVPGTYFPLRKGGIVTLYQDAHVPEGSLPNVMLDHGMHYVHGQCWRDIFEAIRQAKRLVYITGWAVWHKVRLIRDPDSHSHASEYTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRMAGKRHSWAKQQEVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFRTLKTLHKDDYHNPTFTGNTSGCPREPWHDLHSKIDSPAAYDVLTNFEERWLRAAKPKGIKKLKSSYDDALLKIERIPDILRVTDIPSVGDDNPASWHTQIFRSIDSNSVKGFPKEPKDASQQNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWNQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYNALVEVGLEAAFSPQDYLNFFCLGNREAVDIHENITVSGIPPPPNTPQANSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARKQFYPRGQVHGYRMSLWAEHTGTIEDCFLQPESLECVRRVRTMSEMNWKQFASNDVTEMGGHLLKYPVEVSRKGKVKPLPGHEEFPDVGGKIVGSFIAIQENLTI* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1788 1039 MobiDBLite consensus disorder prediction 1 72 - -
Tpr7g1788 1039 MobiDBLite consensus disorder prediction 13 47 - -
Tpr7g1788 1039 Gene3D Endonuclease Chain A 694 939 - -
Tpr7g1788 1039 Gene3D C2 domain 227 363 IPR035892 -
Tpr7g1788 1039 PANTHER PHOSPHOLIPASE D 136 1039 IPR015679 -
Tpr7g1788 1039 PANTHER PHOSPHOLIPASE D ALPHA 1 136 1039 - -
Tpr7g1788 1039 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 885 912 IPR001736 GO:0003824
Tpr7g1788 1039 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 230 370 IPR035892 -
Tpr7g1788 1039 MobiDBLite consensus disorder prediction 48 67 - -
Tpr7g1788 1039 CDD C2_plant_PLD 226 369 - -
Tpr7g1788 1039 ProSiteProfiles C2 domain profile. 219 346 IPR000008 -
Tpr7g1788 1039 SUPERFAMILY Phospholipase D/nuclease 401 649 - -
Tpr7g1788 1039 Pfam C2 domain 232 348 IPR000008 -
Tpr7g1788 1039 Pfam PLD-like domain 737 929 IPR025202 -
Tpr7g1788 1039 Pfam Phospholipase D C terminal 959 1029 IPR024632 -
Tpr7g1788 1039 Gene3D Endonuclease Chain A 424 667 - -
Tpr7g1788 1039 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 550 585 IPR001736 GO:0003824
Tpr7g1788 1039 Pfam Phospholipase D Active site motif 551 585 IPR001736 GO:0003824
Tpr7g1788 1039 SUPERFAMILY Phospholipase D/nuclease 713 971 - -
Tpr7g1788 1039 SMART pld_4 885 912 IPR001736 GO:0003824
Tpr7g1788 1039 SMART pld_4 550 585 IPR001736 GO:0003824
Tpr7g1788 1039 SMART C2_3c 233 345 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1788 Tpr-Chr7 20798034 20806842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1788 28 1039 Phospholipase D Gene Family (Wang group) AT2G42010 68.547 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1788 K01115 - gmx:100805294 1547.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1788 7 20798034 20806842 Tpr7g1788 7 20798034 20806842 ECH