LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1778	ATGGGTGTGATGACTTCCAAAACTATTGAGCGATACCAACGATGCTCATTTAATCCACAACAAGATGACCACCAAATCGATTGTGAAACACAGAGTTGGTACCAAGAGGTGTCTAAGCTGAAGGTTAAGTATGAGGCTCTTCAAAAGACTCAGAGGCAGTTGCTTGGGGAAGATCTTGGACCTTTGAACATAAAGGAGCTGCATAATCTTGAGAAACAACTTGAAGGTGCTTTAGCACAAGCTAGGCAAAGAAAGACACAAATTATGGTTGAACAGATGGAAGAGCTTCGCAAAAGGGAATGCCATTTAGGAGACATGAACAAACAACTAAGACTCAAGCTTGAAAGCGAGGGATTTAATCTTAAAGCTATGGGAAGCTTGTGGAGTTCTAATTCAATTGCTGGAAATAGCAACTTTACCTTTCAGCCACCTCAAACCAACCCTATGACTATGAATATGGATATTCAAGCAGAACCCTTTTTGCAAATAGGATACCAACAGTATGTTCAAGCTGAGGCATCTAATGTTTCAAAGAGCATGGCTTGTGAGACTAACTTCATGCATGGATGGATCCTTTGA	579	0.4076	MGVMTSKTIERYQRCSFNPQQDDHQIDCETQSWYQEVSKLKVKYEALQKTQRQLLGEDLGPLNIKELHNLEKQLEGALAQARQRKTQIMVEQMEELRKRECHLGDMNKQLRLKLESEGFNLKAMGSLWSSNSIAGNSNFTFQPPQTNPMTMNMDIQAEPFLQIGYQQYVQAEASNVSKSMACETNFMHGWIL*	193

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g1778	192	ProSiteProfiles	K-box domain profile.	30	120	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
	Tpr7g1778	192	Coils	Coil	64	87	-	-
	Tpr7g1778	192	PANTHER	MADS-BOX TRANSCRIPTION FACTOR 17	6	178	-	-
	Tpr7g1778	192	Pfam	K-box region	29	114	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
	Tpr7g1778	192	PANTHER	MADS BOX PROTEIN	6	178	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1778	Tpr-Chr7	20506415	20513296	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g1778	3	192	MADS-box Gene Family	AT2G45650	53.535	1.25e-62	192

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g1778	K09264		-	gmx:100820061	294.278

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g1778	7	20506415	20513296	Tpr7g1778	7	20506415	20513296	ECH
	Tpr7g1778	7	20506415	20513296	Tpr6g1704	6	18347050	18353203	ECH
	Tpr5g2719	5	49361991	49368331	Tpr7g1778	7	20506415	20513296	ECH