Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1727 ATGAGTATAAACTCTAGTTGTAGTGGTAGCGGTTGCGGTGGTAGTGGTGGAAGCGGTGGTACTTGCGGCCCATGTGGCGCGTGCAAGTTTTTGAGGAGGAAGTGTATACCGGGTTGTATTTTTGCGCCTTATTTTGATTCGGAGCAAGGCGCTTCACATTTTGCGGCGGTTCACAAGGTTTTTGGTGCTAGTAATGTTTCGAAGTTGCTACAAAATGTTCCGGTGCATAAGCGTCTTGATGCGGTTGTCACCATTTGTTATGAAGCTCAAGCAAGGTTGAGAGATCCTGTTTATGGTTGTGTTGCTCATATCTTTACTCTTCAGCAACAGGTGATGAGCTTACAAGCAGAACTCTCCTACTTACAAGGCCACCTAGCCACATATGAAGTACCTCAACTACCAACACCATCTCCACCACAAGCACTTCCAATGGTTTCACTAACCAACCTCCCATTACTCTCTTCTTCATCCATCCCACCCACATATGACTTATCTTCACTTTTTGATCCTATGGCCCAAAATCCTTCATGGACCATGCATCAAAGGCCCAATGAACCCCATCAATTTTTGGGTAGTGGCACATCAACAAGTAGCAATAGTGGTGGTGATCTTCAATCATTGGCAAGAGAGCTTTTGCATAGATATGGATCTGCTCCATTTTCTCATTCTCATTCCAAATAA 681 0.4449 MSINSSCSGSGCGGSGGSGGTCGPCGACKFLRRKCIPGCIFAPYFDSEQGASHFAAVHKVFGASNVSKLLQNVPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFTLQQQVMSLQAELSYLQGHLATYEVPQLPTPSPPQALPMVSLTNLPLLSSSSIPPTYDLSSLFDPMAQNPSWTMHQRPNEPHQFLGSGTSTSSNSGGDLQSLARELLHRYGSAPFSHSHSK* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1727 226 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Tpr7g1727 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 216 - -
Tpr7g1727 226 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
Tpr7g1727 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1727 Tpr-Chr7 19872299 19877426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1727 27 213 AS2 family AT4G00220 62.304 1.86e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g1727 LOB 3.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1727 K21994 - gmx:100798425 306.605