Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1726 ATGAATTATTTTGGAGGAAAGATTGGTGGTGGAAGTGATCAAATTAGAGGAAATGGTGTTGGTGGACCTTGTGGTGCTTGCAAGTTTTTAAGAAGAAAGTGTGTAAAAGGTTGCATATTTGCACCATATTTTGATTCTGACCAAGGAACGGTTCATTTTGCTGCAGTTCATAAAGTGTTTGGTGCTAGTAATGCCTCTAAGTTACTCATGCGTATTCCAGTTCATAAACGTCTTGATGCTGTTGTTACTCTTTGTTATGAAGCTCTTGCTAGGGCTAGAGACCCTGTTTATGGTTGTGTTGCTCATATCTTTGCACTTCAACAACAGGTCATGAGCTTGCAGGCTGAGTTAACCTATGTTCAGGCAACTCTTGCGACAATGCAACGTCTCCCAATCTCACTTGCTCCGTCTCTTCCAAACCCTCAAAGCACATCACAAAGTCTTCATTCTTCCTCAGATCACTTGGGAACAAATGCTGACTTGCAAAGTGCCTCTAACATGTCCATGAACTTTGATCCACATCAACAACTTTCGACATCATTGGATTTGAGCAGTTTCTTCAATCATTCAGATCAACAACTTGAAGATGATGAACTTCAAGCTTTGGCTAGAGAATTTGTCTCTAGGTACTTGCCTGGAGTAAGATTCCAGCCATCTAATTCTCACTAA 669 0.4081 MNYFGGKIGGGSDQIRGNGVGGPCGACKFLRRKCVKGCIFAPYFDSDQGTVHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVMSLQAELTYVQATLATMQRLPISLAPSLPNPQSTSQSLHSSSDHLGTNADLQSASNMSMNFDPHQQLSTSLDLSSFFNHSDQQLEDDELQALAREFVSRYLPGVRFQPSNSH* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1726 222 Pfam Lateral organ boundaries (LOB) domain 23 121 IPR004883 -
Tpr7g1726 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 18 213 - -
Tpr7g1726 222 ProSiteProfiles LOB domain profile. 22 124 IPR004883 -
Tpr7g1726 222 PANTHER LOB DOMAIN CONTAINING PROTEIN 18 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1726 Tpr-Chr7 19853519 19860646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1726 18 220 AS2 family AT4G00210 54.795 1.61e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g1726 LOB 1.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1726 - - gmx:100791377 315.079