Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1724 ATGTGCATGGAAGGAAGAGAAGGTATGAATCCCGGCGTAACAGTGATAGGGGCAGAAGCTCCATCAGCTTATCATGTAGCACCAAGGAGTGAAGCTCCAAACCAGGTTCATAACCCTGAAGCAGCAGCAGCTGTGGCCGGTACTGCCCCAGCTGCTGCTCCTGTCGGGGTTTCACCCGTAAGTGTAGGTTTGGATGGAACAGTTAAGAAGAAAAGGGGTCGACCAAGGAAATATGGGCCAGATGGGTCTGTCAATATGGCATTGTCACCAGCGCCTATCTCATCTTCGGCTCCGCCCACTCTTCATGACTTCTCATCTGTGAAGCGTGTGAAACCACATGGGATGGAGTTTAAGAGGGCCAAAAAAGTTGTAATGGATCATCTCGGTGAGATGAATGGACACGCTGATGGCACAAACTTTATGCCACATTTCATCACTGTCAATGCCGGAGAGGATATTACAAACAAAGTTATATCTTTTTCTCAACAAGGTCCGCGAGCAATATGCATCTTGTCTGCTACTGGAGCGATTTCAAATGTTACACTCCGTCATCCAGATTCCTCCGGGGGTACTTTGACTTACGAGGGTCGTTTTGAGATCCTTTCCTTGTCTGGATCATTCATGCCTACTGAGAATCAAGGAACAAGAAGCCGGTCAGGTGGAATGAGCGTCTCGCTGGCAAGAACTGATGGTCGCGTTGTAGGCGGTGGAGTTGCTGGTGTTCTTATAGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAACGGCAATCAAGATCAGAAACTGAAGAAGCCGAAGTCTGATTATGCAGCAGCCACATTTACTCAAGCCATTGTGGTATCCTCAGCACCGCCACCACCCCAAACTAATAATGCTGAAAAAGAGGACGTCATGAGTGGAGGTGGACATGTACTGCAAAATTCTGGAAACGTGAACTCAAATTTTACTTCTCCGCCTAGCGCATTTCGAAGAGACAACAACTGGGCCAACATGCAGTCTCTACCGGACACAAGAAAGTCGGCTACTGATATAAACATATCTTTGCCTGATAGTTAA 1065 0.4789 MCMEGREGMNPGVTVIGAEAPSAYHVAPRSEAPNQVHNPEAAAAVAGTAPAAAPVGVSPVSVGLDGTVKKKRGRPRKYGPDGSVNMALSPAPISSSAPPTLHDFSSVKRVKPHGMEFKRAKKVVMDHLGEMNGHADGTNFMPHFITVNAGEDITNKVISFSQQGPRAICILSATGAISNVTLRHPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLARTDGRVVGGGVAGVLIAASPVQVVVGSFLPNGNQDQKLKKPKSDYAAATFTQAIVVSSAPPPPQTNNAEKEDVMSGGGHVLQNSGNVNSNFTSPPSAFRRDNNWANMQSLPDTRKSATDINISLPDS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1724 354 Gene3D - 142 272 - -
Tpr7g1724 354 MobiDBLite consensus disorder prediction 311 354 - -
Tpr7g1724 354 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 258 - -
Tpr7g1724 354 Pfam Plants and Prokaryotes Conserved (PCC) domain 142 255 IPR005175 -
Tpr7g1724 354 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Tpr7g1724 354 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 3 353 - -
Tpr7g1724 354 CDD DUF296 142 255 IPR005175 -
Tpr7g1724 354 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 353 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1724 Tpr-Chr7 19820537 19825674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1724 8 286 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.987 1.46e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1724 - - gmx:100793726 481.1