LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1718	ATGGGCATGTGGGAGCGAGACACATGGAAGTGGAAGTTTGACTGGACAACCGAACTATCCGATATTGAATCAGAAACTGTTCACGATTTGTTGTTAATTCTAGACCAGGTTAGGCCGTCAAGGGAGGCTCGGGATCGGCGTAGGTGGAAACCTCATAAAGCTGGTTTTTTTACTGTCAAAACAGCCTATATAGCGCTGATGCCCAGGCCTGTCCTTGCTTTTGTTATTTGTGAATCACAAGATTGTAGCAAACCCTTCAAGATCATTGTTGTTAGTCAATCAAACTCATCATCAAATTTTACAACAATTCAAAGTGCCATAGATTCTGTTCCTACAGGAAACTCTCAATGGATTCACATCCAAATTTCCTCTGGTGTTTATAGAGAACGAGTCTTCATTCCCAAAGCCAAGCCATGCATTTATCTTGAAGGAGCTGGTAGAAATTCAACAAGTATTGAATGGAGTACACATGTGAATGCTACATTCGTATCAAAAGCAAATAACACAGCTGCAAAGGGCATTACTTTCGTGAATACAATGAACAGTCCAGTAATGTTGGAGGTGCCTAGCATCATACAAGCCAGAGCTGCATGGATCTATGCAGATAAATGTGTTTTCTATGATTGTGCTTTTCTTGGGGTGCAAGATACCCTAAATGATGATTGGGGTCGACATTACTACAAAAATTGTTACATTCAAGGTGGAATCGATTTCATATATGGGGATGGTCAATCTCTTTTTGAGGCAAGTACAATATTTTTTTCAATGGGAAAAAATGGTCCAAAAATAGATGGGGTTATTACAGCACATGAAAGGAAATCACCAAATGACCCAAGTGGGTTTGTGTTTAAAAATTGTAACATAAGTGGGACTGCAGGAGGAAAGGCTGAACTTGGTAGGGCAATGGATGCTTATGCAAGAGTCATCATAGCTGATTCATACTTATCTGATGTGGTTAAACCTGAGGGTTGGAGTCCTAGAACTTTTGTTGGCCATGAGTAA	1002	0.4022	MGMWERDTWKWKFDWTTELSDIESETVHDLLLILDQVRPSREARDRRRWKPHKAGFFTVKTAYIALMPRPVLAFVICESQDCSKPFKIIVVSQSNSSSNFTTIQSAIDSVPTGNSQWIHIQISSGVYRERVFIPKAKPCIYLEGAGRNSTSIEWSTHVNATFVSKANNTAAKGITFVNTMNSPVMLEVPSIIQARAAWIYADKCVFYDCAFLGVQDTLNDDWGRHYYKNCYIQGGIDFIYGDGQSLFEASTIFFSMGKNGPKIDGVITAHERKSPNDPSGFVFKNCNISGTAGGKAELGRAMDAYARVIIADSYLSDVVKPEGWSPRTFVGHE*	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g1718	333	SUPERFAMILY	Pectin lyase-like	87	326	IPR011050	-
	Tpr7g1718	333	Pfam	Pectinesterase	90	326	IPR000070	GO:0030599\|GO:0042545
	Tpr7g1718	333	PANTHER	PECTINESTERASE	80	333	-	-
	Tpr7g1718	333	Gene3D	-	56	332	IPR012334	-
	Tpr7g1718	333	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	80	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1718	Tpr-Chr7	19735304	19740970	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g1718	72	333	Carbohydrate Esterase	AT2G19150	43.071	1.50e-61	196

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g1718	-		-	cam:101494460	395.201