Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1710 ATGACAGATCCTCAATCTATCTATTTTGATGAATGGTTCAACTTCATGCACCTTCACCCTAATCATAATCAATACTCTTCTTCTTCTACTCAACAAACCAACAACATGTTTGATATTCAATCTCATAATCAACCCTCATCATCTTCTTTAACCATAAATCCTCCTTCTCCTCCTCTTAGAGAAGCTCTTCCTCTCATTAACAAATTAAGTCTCATAAATCATCAACAACAACAACAAAATGAACCCTCAAACACAACAATAGAACAAGAAGAATACAAAAGAGTATTGGAAAGGCATGGTGATGATGATGTTGGTGATGAAAGTGTTACTCTTTCCCTACAAATAGGGCTTCCTAGAATGAATAGTAGTTCTTCTTCTAATTTTGGATTAAGGATGGTCTCAAATTGTATAGAAATGGCTGAAAACGAAGCACCTAATATGATTTATGAAAACCCTTTAGATAAATTGAACAAGGTTCAGTATTGGATTCCAACACCTTCTCAAATTTTAATTGGTCTTACACAATTAGCATGTCATGTGTGCTCTAAAACTTTCACCAGATACAACCATCTTAAGATGCATATGTGGGGACATGGACCTCAATACAGAATAGTAGCAGATTCTCTAAAAGGAACACAACCAACAGCAATGTTAAGGCTTCCATGTTTTTGTTGTGTACAAGGTTGCAAATACAACATTGATCACCTTAGAGCAAAGCATTTTAAAGATTTTAGATCTCTTCAAACACATTATAAGAGAATGCATTGTATTAAACTTTATCTGTGTAGAAAATGTGGCAAATCATTTTCAGTGAAAGGTGATTGGAAATCACATGAGAAGGATTGTGGCAAAATATGGTCTTGTTTATGTGGTTTAGATTTTAAAAATAAAAAGTCTATTAAAGATCATCTTAAAGCCTTTGGTTATGGTCATGGTGCTTTTGGCTTTGATTGCTTGCATGAAGAAGATGCAGCTGGTTCCACGAAGTTAAATGTGAAAAGTTGA 1005 0.3423 MTDPQSIYFDEWFNFMHLHPNHNQYSSSSTQQTNNMFDIQSHNQPSSSSLTINPPSPPLREALPLINKLSLINHQQQQQNEPSNTTIEQEEYKRVLERHGDDDVGDESVTLSLQIGLPRMNSSSSSNFGLRMVSNCIEMAENEAPNMIYENPLDKLNKVQYWIPTPSQILIGLTQLACHVCSKTFTRYNHLKMHMWGHGPQYRIVADSLKGTQPTAMLRLPCFCCVQGCKYNIDHLRAKHFKDFRSLQTHYKRMHCIKLYLCRKCGKSFSVKGDWKSHEKDCGKIWSCLCGLDFKNKKSIKDHLKAFGYGHGAFGFDCLHEEDAAGSTKLNVKS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1710 334 Pfam Zinc finger, C2H2 type 178 195 IPR013087 -
Tpr7g1710 334 PANTHER ZINC FINGER PROTEIN WIP2 1 327 IPR043584 GO:0003700|GO:0010468
Tpr7g1710 334 ProSitePatterns Zinc finger C2H2 type domain signature. 178 198 IPR013087 -
Tpr7g1710 334 SMART c2h2final6 222 255 IPR013087 -
Tpr7g1710 334 SMART c2h2final6 176 198 IPR013087 -
Tpr7g1710 334 SMART c2h2final6 260 280 IPR013087 -
Tpr7g1710 334 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 1 327 - -
Tpr7g1710 334 ProSiteProfiles Zinc finger C2H2 type domain profile. 176 203 IPR013087 -
Tpr7g1710 334 ProSiteProfiles Zinc finger C2H2 type domain profile. 260 280 IPR013087 -
Tpr7g1710 334 SUPERFAMILY beta-beta-alpha zinc fingers 241 280 IPR036236 -
Tpr7g1710 334 SUPERFAMILY beta-beta-alpha zinc fingers 173 198 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1710 Tpr-Chr7 19610883 19614386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1710 1 327 C2H2 Transcription Factor Family AT3G57670 45.528 1.10e-94 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g1710 zf-C2H2 0.0039 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1710 - - gmx:100794446 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1710 7 19610883 19614386 Tpr7g1710 7 19610883 19614386 ECH