Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1704 ATGAATGATGGAAGACAAATGGGGTTGCATTATATGGATGCTGGTGGTTTTCCTTATGCTGTTAATGAAAATTTTGTGGATTTCTTTCAAGGCATCAATCATGTTCCTGTGAATTATGCTTTTCCTGGCTCAATGCCTGATCAGGATAGTGCCTACTGGTCGATGAACATGAGTCCCTATAAGTTTGGAATGTATGGACCTGGAAGCACATCTTATTACAATTCTTATGAGGTAAACGATCACTTGCCAAGAATGGAGAACAACAGGACCGAGTGGGAATACCCTTCTGAAGTCATCTCTGAGGAACCAGCTTCAACAGATTCTCCATCTAGAAGAGATGGAGTTAGCATGCAGACTATCCCTGAAGAATGTAGTCCCAATCATCAAGAGTCCAGTAGTAGCCAGGTGATATGGCAAGACAACATTGATCCTGACAATATGACTTATGAGGAGCTACTTGACCTCGGGGAAGCAGTTGGAACTCAAAGCCGAGGTCTTCCCCAAGAACTTATTGACACACTTCCAACTTCGAAGTACAAATTCGGCAGCTTATTCAAAAGAAAAAACTCTGGGAAAAGGTGTGTAATTTGCCAGATGACATATAGAAGAGGTGACCAGCAAATGAAATTGCCATGCAGTCATGTTTATCATGGTGAATGCATTACCAAATGGCTTAGCATTAACAAGAAATGTCCTGTTTGCAACACTGAGGTTTTTGGCGAGGAATCTATGCAGTAG 738 0.4173 MNDGRQMGLHYMDAGGFPYAVNENFVDFFQGINHVPVNYAFPGSMPDQDSAYWSMNMSPYKFGMYGPGSTSYYNSYEVNDHLPRMENNRTEWEYPSEVISEEPASTDSPSRRDGVSMQTIPEECSPNHQESSSSQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLPQELIDTLPTSKYKFGSLFKRKNSGKRCVICQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNTEVFGEESMQ* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1704 245 MobiDBLite consensus disorder prediction 97 117 - -
Tpr7g1704 245 SUPERFAMILY RING/U-box 193 239 - -
Tpr7g1704 245 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER 1 244 - -
Tpr7g1704 245 SMART ring_2 194 234 IPR001841 -
Tpr7g1704 245 Pfam Ring finger domain 193 235 IPR001841 -
Tpr7g1704 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 239 IPR013083 -
Tpr7g1704 245 ProSiteProfiles Zinc finger RING-type profile. 194 235 IPR001841 -
Tpr7g1704 245 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 244 IPR033276 GO:0004842|GO:0016567|GO:0046621
Tpr7g1704 245 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1704 Tpr-Chr7 19498082 19503377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1704 10 245 C3H Transcription Factor Family AT3G63530 55.042 2.06e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1704 K19045 - gmx:100792734 445.277