Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1684 ATGGACCGGTCTCATGTTTATAGTAGTTGTTTTTGGTTGGGTCTTCCTAGTAGATTTTGTGTGGAACACTTTCCAAAAACGGTGTATAATATGACTTTAGAGGATGAAGATGCCTCAGAGTATGATGTTGTTTACCTTGGTAGTAGAGGTGGCCTAAGTGGTGGCTGGAGAGCATTTGCATTGGAAAATAAATTGGATGATGGTGATGCACTTGTTTTTGAATTGGTTGAACCAACAAGGTTTAAGATTTACATTGTTAAAGCATTTCCAAATATAGATGAACAAGAAGAAGAAGAAAACAATACTCTGGTGCAAGAAATTATGCACACATCCAAAGTAACAAAAGTATCCAAGACTTCCTCTAATCGTGGATCAAAATCAAAGAAAACTAAAATGCAAAAATATGTCACTGAAACGAAGTCATCAGGGGTAAATCCGAATAAGAAACATCACCTGTAA 459 0.3617 MDRSHVYSSCFWLGLPSRFCVEHFPKTVYNMTLEDEDASEYDVVYLGSRGGLSGGWRAFALENKLDDGDALVFELVEPTRFKIYIVKAFPNIDEQEEEENNTLVQEIMHTSKVTKVSKTSSNRGSKSKKTKMQKYVTETKSSGVNPNKKHHL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1684 152 MobiDBLite consensus disorder prediction 114 152 - -
Tpr7g1684 152 Gene3D - 1 89 IPR015300 -
Tpr7g1684 152 ProSiteProfiles B3 DNA-binding domain profile. 1 89 IPR003340 GO:0003677
Tpr7g1684 152 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 1 104 - -
Tpr7g1684 152 CDD B3_DNA 1 87 IPR003340 GO:0003677
Tpr7g1684 152 SUPERFAMILY DNA-binding pseudobarrel domain 3 87 IPR015300 -
Tpr7g1684 152 SMART B3_2 1 89 IPR003340 GO:0003677
Tpr7g1684 152 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 1 104 IPR044837 -
Tpr7g1684 152 Pfam B3 DNA binding domain 5 85 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1684 Tpr-Chr7 19250857 19251315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1684 1 93 B3 DNA Binding Superfamily AT5G58280 62.366 2.59e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr7g1684 B3 3.1e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1684 - - cam:101498339 183.341