Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1672 ATGAATACACCTTCCTTTCTAACCTTGTTTTCCATTTGTTTAGTTTTTTCTTTCTCTCATGCACTAAACAATGGTTTTAGTGTTGAACTTATTCATCGTGACTCTCCAAAATCACCACTTTACAAGCCCACACAAAATAAGTATGAACATATTATCAATGCTGCACGTCGTTCCATCAACCGTGCCAATCATTTGAACAAAGTTTCCCTCACAGCAAGTACACCTGAATCAACTGTAATCCCCGATGGCGGTGAGTATCTCATGACCTATTCAGTTGGTACCCCTCCATTTAAGTTATACGGTGTTGCTGATACCGGTAGTGACATTGTTTGGCTTCAATGTGAACCTTGTGACCCATGTTTCAACCAAACATCTCCGAAATTTAATCCATCAAAGTCATCATCTTACAAAAACATTCCTTGTTCATCTGACCTATGTCAATCCGTAAGAGATTCCTCTTGTAATAGCGATAATTGTCAATATACTATTAAATACGGTGATGGATCACATTCTGAAGGAGATCTTAGTCTTGAAACTCTTGCATTGGAATCCACTACTGGTCGTCGTATTTCGTTTCCTAAAACTGTGATAGGATGTGGAACAGACAATACAATGTCGTTTGAAGGTCAAAGCTCTGGTATAGTTGGCCTTGGTGGTGGACCAGTGTCTCTTATAACACAATTGGGGTCTTCAATTGGTGGAAAATTTTCTTATTGCTTGTTGCCATCATCCTTCCGTGAGTCAAACACGACGACCAAACTCAATTTTGGAGATGCCGCTGTGGTTTCAGGAGATGATGTTTTGTCAACTCCTATAGTGAAAAAGAATCCAGCAGTTTTCTACTATTTGACATTGGAATCAATGACTGTTGGAAACAAAAGATTCAAATACGGAGGATCATTTTTGGGTGATTCAGAGGAGGGTAACATCATAATTGATTCAGGTACAACTTTGACGCTTTTACCATCTGACGTTTATAGCAATTTGGAATCAGCCGTTTCAGAAGTGGTGAAACTAAATCGTGTTGACAGTCCTATTCAACTATTAAACCTTTGCTATAGTCTTACATCAGACAACTATGATTTTCCTATAATCACGGCACACTTTAAAGGCGCTGATGTTAAGTTGCTTCCTATTAATACTTTTGTTGCTGTTGCTGATGGTGTTGTTTGCTTAGCTTTTACACCAACTCAGACGTTACCCATCTTTGGAAATATAGCTCAACAAAATTTCTTGATTGGTTATGACATTCTACAAAAAACTGTGTCCTTTAAGCCAATTGATTGTAGCAAAGTTTAA 1299 0.3811 MNTPSFLTLFSICLVFSFSHALNNGFSVELIHRDSPKSPLYKPTQNKYEHIINAARRSINRANHLNKVSLTASTPESTVIPDGGEYLMTYSVGTPPFKLYGVADTGSDIVWLQCEPCDPCFNQTSPKFNPSKSSSYKNIPCSSDLCQSVRDSSCNSDNCQYTIKYGDGSHSEGDLSLETLALESTTGRRISFPKTVIGCGTDNTMSFEGQSSGIVGLGGGPVSLITQLGSSIGGKFSYCLLPSSFRESNTTTKLNFGDAAVVSGDDVLSTPIVKKNPAVFYYLTLESMTVGNKRFKYGGSFLGDSEEGNIIIDSGTTLTLLPSDVYSNLESAVSEVVKLNRVDSPIQLLNLCYSLTSDNYDFPIITAHFKGADVKLLPINTFVAVADGVVCLAFTPTQTLPIFGNIAQQNFLIGYDILQKTVSFKPIDCSKV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1672 432 ProSiteProfiles Peptidase family A1 domain profile. 86 425 IPR033121 -
Tpr7g1672 432 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 310 321 IPR001969 GO:0004190|GO:0006508
Tpr7g1672 432 Gene3D Acid Proteases 64 258 IPR021109 -
Tpr7g1672 432 Gene3D Acid Proteases 262 432 IPR021109 -
Tpr7g1672 432 CDD pepsin_A_like_plant 85 429 IPR034161 -
Tpr7g1672 432 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 7 430 - -
Tpr7g1672 432 Pfam Xylanase inhibitor N-terminal 86 258 IPR032861 -
Tpr7g1672 432 Pfam Xylanase inhibitor C-terminal 281 425 IPR032799 -
Tpr7g1672 432 SUPERFAMILY Acid proteases 79 430 IPR021109 -
Tpr7g1672 432 PANTHER OS07G0603500 PROTEIN-RELATED 7 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1672 Tpr-Chr7 19059422 19060720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1672 67 432 Miscellaneous Gene Families AT1G77480 25.871 6.59e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1672 - - gmx:100789696 518.079