Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1615 ATGGAAACCAATCGCCGCGCTGTCCGAACCTTAGTTTCAAAACTCAGCTCCGTTTCCGAACAAACACGAATCGAAGCACTCTGCGAGCTTCGGTTAATGTCAAAACAAGATCCACAAACCCGACCCGTAATAACCGAATCGGGCGCAATCCCTTATCTAGCAGAAACTCTCTATTCATCTTCTCACCCTTCGCAAGAAAACGCCACCGCAACACTTCTCAATCTTTCGATAACAGAAAAAGAATCTATCATGTCCACGCGCGGTGTTCTCGACGCACTTTCACATATAATTTCTCATCATTCTTCAACCTCCGCCGCCGCCGCCGTTCAATCAGCTTCCGCCACGATTCACAGCCTTCTTTCGTCGGTAGATGATTATAGAACCGTCGTTGGATCTAAACGTGAAATCGTTTACGCGCTTGTTGATATTCTCCGATGTCATAGATCGTCACCGCCGAGAACTGTGAAAGATGCGTTGAAAGCGCTTTTTGCGATCGCGCTTCATCCGTTAAACCGTGCTACTATGGTTCAATTCGGCGTTGTTCCGGCGCTTTTTTCTCTGATTGTTAACGACGGGAGAGTCGGGATAGTTGAAGACGCAACCGCCGTGATCGCGCAGGTTGCCGGTTGTGAGGAAAGCGTTGAAGCTTTCCGGAAGGTTTCCGGTGTTGGAGTGCTTGCGGATCTGCTTGATCTTAATACTGGTTCTAGTATGAGGACGAGAGAAAATGCGGTGTCGGCGTTGCTTAATCTTGTCCGGTGTGGTGGAGATGCGGTGGCCGGAGATGTTAGAGACGCTGTTGCTTTCGGTGCCTTGGACGGAATCGCCGATGTTAGAGATAAAGGGAGCGTTAAGGGGCAGAGTAAAGCTATGGAGTTGATGAGGGTGATGCTTGGTGGTGGTGATAGGAATGTCGTTTTGAACAGTGGTTCGTCGTTTGGTTCTTCTGTGATGAATGATGATAGTGGTACGTCGTTTTGA 981 0.4883 METNRRAVRTLVSKLSSVSEQTRIEALCELRLMSKQDPQTRPVITESGAIPYLAETLYSSSHPSQENATATLLNLSITEKESIMSTRGVLDALSHIISHHSSTSAAAAVQSASATIHSLLSSVDDYRTVVGSKREIVYALVDILRCHRSSPPRTVKDALKALFAIALHPLNRATMVQFGVVPALFSLIVNDGRVGIVEDATAVIAQVAGCEESVEAFRKVSGVGVLADLLDLNTGSSMRTRENAVSALLNLVRCGGDAVAGDVRDAVAFGALDGIADVRDKGSVKGQSKAMELMRVMLGGGDRNVVLNSGSSFGSSVMNDDSGTSF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1615 326 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Tpr7g1615 326 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 304 - -
Tpr7g1615 326 SMART arm_5 37 77 IPR000225 GO:0005515
Tpr7g1615 326 SMART arm_5 122 167 IPR000225 GO:0005515
Tpr7g1615 326 SMART arm_5 168 209 IPR000225 GO:0005515
Tpr7g1615 326 SMART arm_5 210 253 IPR000225 GO:0005515
Tpr7g1615 326 SUPERFAMILY ARM repeat 6 297 IPR016024 -
Tpr7g1615 326 PANTHER U BOX DOMAIN-CONTAINING 2 304 - -
Tpr7g1615 326 Gene3D - 1 286 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1615 8 294 U-box Gene Family AT2G23140 33.681 8.04e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1615 - - mtr:MTR_8g039560 511.531