Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1614 ATGGCTGATTCGTTCGAAAGTAATAAAAGACCAATTTTCAGAGACATTAGACGCTATTTTTGTGACTATTGTGGCATCTCTAGGTCCAAGAAGACCCTAATTACCTCTCACATCAATTCTCATCATCAAGTGGAAGTGGAAAAAGCAGGACTCCAAAGAGATCAAGAAGCACAAGGTATAAAATCGAATACTTGTAAAGAATGTGGCGCTAGTTTCAGAAAACCTGCCTATCTATTGCAGCACATGCAAAGTCATTCACTTGAGAGGCCGTACATTTGTACTTTTGATGGTTGTCAGGTGAGTTACAGAAGAAAGGACCATTTGAATCGTCATCTTCTACAACATGAAGGGAAAAAATTTAAATGTCCAATCGAGAATTGCAACCGTGACTTTAGTTTCGAGGGAAACGTGACAAGACATGTCAAGCAGTTTCATAACAAGGATTCTTCTACCTCTATTGATGTTAAAATTCAGAAGCAGCATGTGTGCCCGGAAATTGGCTGTGGGAAAGTTTTCAAATTTGCATCAAAGCTAGAGAAGCACAAAGATTCTCATGTTAAGCTGGAGTCAATAGAGACAGTGTGCTTATATCCTGGGTGTATGAAGCATTTTACTAGTATCCAGTGCCTTAGAGCACACACTAAATCCTGCCATCAGTATGTGACCTGTGAAACTTGTGGGGAAAAGCAACTTGAGAAGAACATTAAAAGGCATCTCCGTAAGCATGAAAATGGTAGTTCATCCGAGGTGTTTGATTGTGATTATAAGGGTTGTAGCTGCACCTTCTCAAGTAAATCCAATCTTTCCAAGCATGTCAAGGCTATCCATTTGCAAGATAAACCCTATATGTGCAGCTTTCCTGATTGCGGCATGAAATTTGCTTATAAACACGTGAGAGATAACCATGAAAAATCCGGTTCACATGTTTTTACCCTAGGGGATTTTGAAGAAACTGATGAACAATTCAGGTCAAGGAATAGGGGAGGGAGAAAGAGAAAGTGTCCTACAGTTGAAATGTTGATTAGGAAGAGAGTTGCTCCCCCAACTCAACTAGAGGTGCTAATGAAGGGTATTGATATTGAGTAG 1086 0.3987 MADSFESNKRPIFRDIRRYFCDYCGISRSKKTLITSHINSHHQVEVEKAGLQRDQEAQGIKSNTCKECGASFRKPAYLLQHMQSHSLERPYICTFDGCQVSYRRKDHLNRHLLQHEGKKFKCPIENCNRDFSFEGNVTRHVKQFHNKDSSTSIDVKIQKQHVCPEIGCGKVFKFASKLEKHKDSHVKLESIETVCLYPGCMKHFTSIQCLRAHTKSCHQYVTCETCGEKQLEKNIKRHLRKHENGSSSEVFDCDYKGCSCTFSSKSNLSKHVKAIHLQDKPYMCSFPDCGMKFAYKHVRDNHEKSGSHVFTLGDFEETDEQFRSRNRGGRKRKCPTVEMLIRKRVAPPTQLEVLMKGIDIE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1614 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 282 308 IPR013087 -
Tpr7g1614 361 SUPERFAMILY beta-beta-alpha zinc fingers 234 289 IPR036236 -
Tpr7g1614 361 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Tpr7g1614 361 ProSitePatterns Zinc finger C2H2 type domain signature. 195 218 IPR013087 -
Tpr7g1614 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 251 281 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 251 276 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 19 41 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 193 218 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 63 85 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 91 115 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 282 308 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 120 145 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 161 185 IPR013087 -
Tpr7g1614 361 SMART c2h2final6 221 242 IPR013087 -
Tpr7g1614 361 ProSitePatterns Zinc finger C2H2 type domain signature. 253 276 IPR013087 -
Tpr7g1614 361 Gene3D Classic Zinc Finger 247 335 - -
Tpr7g1614 361 Gene3D Classic Zinc Finger 92 116 - -
Tpr7g1614 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 120 IPR013087 -
Tpr7g1614 361 Pfam Zinc finger, C2H2 type 161 185 IPR013087 -
Tpr7g1614 361 Pfam Zinc finger, C2H2 type 251 276 IPR013087 -
Tpr7g1614 361 Pfam Zinc finger, C2H2 type 91 115 IPR013087 -
Tpr7g1614 361 Pfam Zinc finger, C2H2 type 64 85 IPR013087 -
Tpr7g1614 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 150 IPR013087 -
Tpr7g1614 361 Gene3D Classic Zinc Finger 6 91 - -
Tpr7g1614 361 ProSitePatterns Zinc finger C2H2 type domain signature. 122 145 IPR013087 -
Tpr7g1614 361 ProSitePatterns Zinc finger C2H2 type domain signature. 284 308 IPR013087 -
Tpr7g1614 361 PANTHER ZINC FINGER PROTEIN 10 354 - -
Tpr7g1614 361 Gene3D Classic Zinc Finger 156 186 - -
Tpr7g1614 361 Gene3D Classic Zinc Finger 117 155 - -
Tpr7g1614 361 SUPERFAMILY beta-beta-alpha zinc fingers 77 119 IPR036236 -
Tpr7g1614 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 161 190 IPR013087 -
Tpr7g1614 361 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Tpr7g1614 361 PANTHER - 10 354 - -
Tpr7g1614 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Tpr7g1614 361 ProSitePatterns Zinc finger C2H2 type domain signature. 93 115 IPR013087 -
Tpr7g1614 361 SUPERFAMILY beta-beta-alpha zinc fingers 118 147 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1614 Tpr-Chr7 18329172 18333706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1614 87 311 C2H2 Transcription Factor Family AT1G72050 47.826 1.18e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr7g1614 zf-C2H2 0.013 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1614 K09191 - gmx:100801812 547.74