Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1588 ATGTCTGGGTTTTCTGTTCGCAAAGGCCATGTGATTAGAAATCGGGAGCGGCATGTTTTGCAGCAAACATTTTTATGTTCCCGCGAAGGATTTAGACATTCGCAGGGTTTAAATCCGGAAGATCGACAACGTCAACAAAAGAACACAACAAGACGTGGGTGTATGGCAAAATGTAGAGTGCACATAGACATCAGATCCAGAAGATGGTATGTCACCGTATTTGAATTTGAACACAACCATGAGCTGTTGAATGGAACAATGTGTGGTTTTTTACCAGCATATAGGAAAATGGCTCAAGGTGATATAGATGAGATTGAGCGCAACCGAACGGCAGGGATAAGACCATATCAGGTGTATGGTTCGATGGCTAATGCATCTGGCGGTTTCCACAAAGTGGGGTTTGTTAAAAAGGATTTGTACAACCAAGTTGGGAAACAGCGCAAAGAAGTGTATTCTGATACGTGCCGTGCAGTGAGGTATCTCAGAGATCTCAGCACCAAAGACCCACTAATGTTTGTCACACATTCCATTGACTTGGAAAGAAGGCTTGAGCGGCTATTTTGGTGTGATGGGGAAAGTCGAAAGAACTACGAAATATTTGGTGATGTTGTGGCCTTCGATGCCACTTACCGGAAAAACAATTACAATTGCCCGTATTGTAACCCGAGAAACCGAAGAGACATGTGTGGCTGCTGGAACAATTCTTGA 708 0.4364 MSGFSVRKGHVIRNRERHVLQQTFLCSREGFRHSQGLNPEDRQRQQKNTTRRGCMAKCRVHIDIRSRRWYVTVFEFEHNHELLNGTMCGFLPAYRKMAQGDIDEIERNRTAGIRPYQVYGSMANASGGFHKVGFVKKDLYNQVGKQRKEVYSDTCRAVRYLRDLSTKDPLMFVTHSIDLERRLERLFWCDGESRKNYEIFGDVVAFDATYRKNNYNCPYCNPRNRRDMCGCWNNS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1588 235 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 219 IPR031052 GO:0006355
Tpr7g1588 235 PANTHER OS02G0262500 PROTEIN 2 219 - -
Tpr7g1588 235 Pfam FAR1 DNA-binding domain 2 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1588 Tpr-Chr7 18022212 18022975 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g1588 FAR1 2.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1588 - - mtr:MTR_1g070355 225.713