Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1532 ATGAATACTGCTTTCGATCTAGTGATTAGAGATGGTAGCGCTGAAGATATGGCTGCAGAAATAATGGGTTTACATGCAGAATGCCTGGAGGAAAATTTTGGGAAGATCACGCTTCTTAGGGAGAAAGGGAAAATGAATGATCTTCTAATGCATGCATCACAATGTCGTTCTGCACGTTGTCGATATCCTAATTGTCGTAAAGTGAAGGGCCTCTTCCGGCATGGTATGTACTGCAGAACACGTGCTTCCGGAGGCTGCGTTATGTGCAAGAAAATGTGGTATTTGATTCAATTTCATGCTCGTGCGTGCAACAAATCGGACTGCAAACTTCCGCGATGCAGTGATGTCAAAGAACATCTAAGGAGGCTGCAACAATAA 378 0.4365 MNTAFDLVIRDGSAEDMAAEIMGLHAECLEENFGKITLLREKGKMNDLLMHASQCRSARCRYPNCRKVKGLFRHGMYCRTRASGGCVMCKKMWYLIQFHARACNKSDCKLPRCSDVKEHLRRLQQ* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1532 125 ProSiteProfiles Zinc finger TAZ-type profile. 32 116 IPR000197 -
Tpr7g1532 125 PANTHER CBP/P300-RELATED 43 125 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tpr7g1532 125 SUPERFAMILY TAZ domain 41 117 IPR035898 -
Tpr7g1532 125 SMART TAZ_2 34 114 IPR000197 -
Tpr7g1532 125 Gene3D TAZ domain 39 125 IPR035898 -
Tpr7g1532 125 PANTHER HISTONE ACETYLTRANSFERASE HAC12 43 125 - -
Tpr7g1532 125 Pfam TAZ zinc finger 46 113 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1532 Tpr-Chr7 17164626 17170409 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tpr7g1532 zf-TAZ 1.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1532 K04498 - ccaj:109812675 155.992