Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1523 ATGGATGAATTGGAAAGGCTTAACAACACAGTTGAATCTATTAGAGCTGTGTTACTTGATGCTGATGAGAAACAAGAGCAAAGTCATGTCATACAAAATTGGGTTAGAAGGCTCAAAGATGTGCTTATTCCTGCAGATGACTTGCTAGATGAATTTGTTATTCAAGATATGATACAAAAAAGGGATCATAAACCTCATCAAAACAAACTAACAAAGGTACTTCATTCCTTCTCTCCAAACAAAATTGCTTTTCGCCGAGACATGGCTCGTGAGATTGTAAAAATACAAAACAAGTTTAATGATGTGGTGAGAGATATGTGTGGGTTGAATTTAAACTCAAATGTTGCGGTGGTTGAGAAAACTAATAGTGAACGAAGGGAAACCGATTCTTATGTGTCAGAATCAGATATCATTGGAAGAGAAGAAGATAAGAACAAGATTATAAGCTTGTTGAAACAGCCTTGTGAAATTCAGAATGTGTTTGTGGTTGCTATTGTTGGGATTGGTGGTTTAGGAAAGACAACTCTTGCTCAGTTGTTATATAATGACATGGAGGTACAGAATTTGTTTGAAAAGAGTATGTGGGTATGTGTCTCTGAGAACTTTGATGTCAAAACTATTATGAAGAATATGTTGATGTCACTAACCAAGAATAAAATTGATGATACATTACCATTGGACTACCTGCAAAATATGCTTCGAAACAATTTAACCGGTAAGAGATACTTGTTAGTCCTAGACGACGTTTGGAATGAGAGTTATGAAAAATGGGCTCAATTGAGAACTTATTTGATGTGTGGTGCTCGAGGCAGTAATGTTGTATTGACAACTCGTAATACAATGGTGGCAAAAACCATGGGTGTAAGTGTCCTCCATGTTTTGAATGGTTTGAGTCCAACAGAATCTTGGAGTTTATTAAAGAAGATTACATTTGGAGATGATACCATTAGAGTGAATCAGACATTTGAATCAATTGGTAAGAAGATCGCAGAAAAGTGCAAAGGAGTTCCATTAGCAATTAGATCATTGGGAGGAATATTACAGAGTAAAAGTGAAGAAAAAGAATGGATTGATGTCTTAACAAGTGATTTTTGGAAAGTGTGTGAGGTTAAAGATAGCATCTTGCCGGTCCTAAAATTGAGTTATCTTAACTTGTCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTTTATATCCTAAGTGTTGGAAATTTAATAAGGATGAGTTGATTCAAATGTGGATGGCACAAGGGTATCTTGACTGTTCAGTTGAAGGGCAATGCATGGAAGATGTTGGTAACCAATTCATTAAAATTTTCTTGATGAAATCATTCTTCAAAGATGCAAGAATAAATGCAGATGGTGATATATATGGTTTTAAAATGCACGATTTAATGCACGATCTTGCGACACAAGTAGCTGGCAATGATTGTTGTTACTTGAATAGTAAGACAAAAAGATGTCTAGGAAAACCGGTGCATGTATCGGTGGAACTGGATGCAATTTGTTTATTGGAATCATTGGATGCTAGTAGGCTGCGAACTTTGATTGTCTTTTCTTTCAAAAGCGATGGTTTTTTGGATACACAGAAATTGTCAGTAATTTCAACATTCAAATACTTGTGTGTCTTGAAGCTGTGCAATTTTATTGAAAACTTGTGTTTGCGTAATGATATGGACCAATTTATCAATGCAATGTTGAATGTGCAGAGAGCTGTTATGACAGATGCTGAAGCCGATGCATGGACTTCCTTTAAGTCCTTCAATGAATCGAGAATCAAGGTTCCTAAGGATGTAACTGGGAAGGAGATGGTCACGGAGGTGTAA 1827 0.3612 MDELERLNNTVESIRAVLLDADEKQEQSHVIQNWVRRLKDVLIPADDLLDEFVIQDMIQKRDHKPHQNKLTKVLHSFSPNKIAFRRDMAREIVKIQNKFNDVVRDMCGLNLNSNVAVVEKTNSERRETDSYVSESDIIGREEDKNKIISLLKQPCEIQNVFVVAIVGIGGLGKTTLAQLLYNDMEVQNLFEKSMWVCVSENFDVKTIMKNMLMSLTKNKIDDTLPLDYLQNMLRNNLTGKRYLLVLDDVWNESYEKWAQLRTYLMCGARGSNVVLTTRNTMVAKTMGVSVLHVLNGLSPTESWSLLKKITFGDDTIRVNQTFESIGKKIAEKCKGVPLAIRSLGGILQSKSEEKEWIDVLTSDFWKVCEVKDSILPVLKLSYLNLSPQQRQCFAYCSLYPKCWKFNKDELIQMWMAQGYLDCSVEGQCMEDVGNQFIKIFLMKSFFKDARINADGDIYGFKMHDLMHDLATQVAGNDCCYLNSKTKRCLGKPVHVSVELDAICLLESLDASRLRTLIVFSFKSDGFLDTQKLSVISTFKYLCVLKLCNFIENLCLRNDMDQFINAMLNVQRAVMTDAEADAWTSFKSFNESRIKVPKDVTGKEMVTEV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1523 608 CDD RX-CC_like 2 98 IPR038005 -
Tpr7g1523 608 PANTHER DISEASE RESISTANCE PROTEIN RP 5 557 IPR044974 GO:0006952
Tpr7g1523 608 Pfam NB-ARC domain 140 361 IPR002182 GO:0043531
Tpr7g1523 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 396 IPR027417 -
Tpr7g1523 608 Gene3D - 1 91 - -
Tpr7g1523 608 Gene3D - 119 292 IPR027417 -
Tpr7g1523 608 Gene3D - 382 473 IPR036388 -
Tpr7g1523 608 PRINTS Disease resistance protein signature 162 177 - -
Tpr7g1523 608 PRINTS Disease resistance protein signature 236 250 - -
Tpr7g1523 608 PRINTS Disease resistance protein signature 333 347 - -
Tpr7g1523 608 Coils Coil 4 24 - -
Tpr7g1523 608 Gene3D - 296 381 IPR042197 -
Tpr7g1523 608 PANTHER OS05G0414200 PROTEIN 5 557 - -
Tpr7g1523 608 Pfam Rx N-terminal domain 2 64 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1523 Tpr-Chr7 17079896 17082001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1523 152 393 WRKY Transcription Factor Family AT5G45050 25.869 1.10e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1523 - - mtr:MTR_8g027540 820.461