Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1518 ATGTCTTCTCATTGTTCTCAAGAACTTAATCATGAAAGTCTTGGTGTCCACTTTTTCAAGATTATTCTTCAAACTACCATTCAACAAGGAAAATTGAGAGTGCCAATAAGTTTTGTGAGAAGGCATTGGAAAGGAATAACAAACCCAGTTACCCTAAGGCTTCCAAATTTGACTGAAAAGAAAGTTTTTTGGGAGAAAACTAGTGATTATGATGTTTGGTTTTGCAATGGTTGGAAAGAATTTGCAAATTATTTGTCTTTGGGTGATTCAGAATTTTTGGTGTTTCGATATCAACGAAATTCGCTCTTTAATGTGATTGGGTTCAGAAAATGTGGATTAGAAATAAAATATCCTTTAAGAGAAACTACAGAAGAATCTCAAGACGATGAAGAGAACGACTGTCCTGTGACGACGATCATTAATGATCATTCATCATTGCGGGTTAAAAGGCCAAAATCTCCATCACCGTCTTCGAATGTTTGTAAGAAGATAATCAACCCAAAAACAGGAAGTAGTTGTGATTATCTTAAGAAGAGAAGCAGAGTTTTGTCTGAGAAAGTGAAGAAAAACTTTGTCTCAGATGATAAGGACTTCTTTACATGTATGATCCTAAAGACATACAATGGGAGAGATCTGTTGGTAACTAACTATCATTTGATCACCATTTTTTTTGTTTGA 678 0.3451 MSSHCSQELNHESLGVHFFKIILQTTIQQGKLRVPISFVRRHWKGITNPVTLRLPNLTEKKVFWEKTSDYDVWFCNGWKEFANYLSLGDSEFLVFRYQRNSLFNVIGFRKCGLEIKYPLRETTEESQDDEENDCPVTTIINDHSSLRVKRPKSPSPSSNVCKKIINPKTGSSCDYLKKRSRVLSEKVKKNFVSDDKDFFTCMILKTYNGRDLLVTNYHLITIFFV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1518 225 PANTHER B3 DOMAIN-CONTAINING 9 171 - -
Tpr7g1518 225 Gene3D - 11 111 IPR015300 -
Tpr7g1518 225 CDD B3_DNA 17 109 IPR003340 GO:0003677
Tpr7g1518 225 SUPERFAMILY DNA-binding pseudobarrel domain 16 110 IPR015300 -
Tpr7g1518 225 ProSiteProfiles B3 DNA-binding domain profile. 17 111 IPR003340 GO:0003677
Tpr7g1518 225 SMART B3_2 18 111 IPR003340 GO:0003677
Tpr7g1518 225 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1518 Tpr-Chr7 16997304 16998080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1518 18 132 B3 DNA Binding Superfamily AT1G49475 40.678 3.56e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1518 - - mtr:MTR_4g119990 247.284