Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1516 ATGAAGAGGTCTCCACCATCTTCAAGTTCATCATCTTCATCTTCTATTGGATTTGAGAATCCAATTCAATCAGAGAAAAAAAGAGGTGCTAAGAGTAAGAATCCAAAAAACAATCTCAATCTCAAGTCACAGAATTTCAAGCAAAAGAAGAACCAAACAAATGGTGGTAGTAGAAGAAGCTCCATTTATAGAGGAGTTACAAGACATAGGTGGACTGGGAGATTTGAAGCTCATCTTTGGGATAAGAGTTCTTGGAACAACATTCAGAGCAAGAAGGGAAAACAAGTTTATTTGGGTGCTTATGATACTGAAGAAGCAGCAGCTCGTACTTATGATCTTGCAGCACTTAAGTATTGGGGGAAGGATGCAACCTTGAATTTTCCGATAGAAACTTATGCAAAAGAGTTTGAGGAAATGGACAAGTCCTCAAAAGAAGAGTATTTGGCTTCTTTGCGGCGGCAAAGCAGTGGCTTTTCTAGAGGCATTTCTAAGTACCGTGGAGTTGCCAGGCATCACCATAATGGTCGCTGGGAAGCTCGCATTGGAAGAGTTTGTGGTAACAAATACCTCTACTTAGGCACTTACAAAACTCAAGAAGAGGCAGCAGTGGCATATGATAAGGCAGCAATAGAGTACAGAGGAATGAATGCAGTGACAAATTTCGACATAAGCAATTACATGGACAAATCAAAGAATAAGAAAAATGATGAAACAGAACAAACAGAACAACAACAAACAATAACAGAAATTGTTCCTAATAATTCCTCTGATTCTGAAGAATTATCAGAAGAACAAACAACAGCTACACCACCTACAGAAATGGAACCACAAAATCAACAGGTTCAACAACATCAACAACATGTGTCTCCAATTGTTCATGAGGAACATACAATAGTTAATGTTATGGATCATTACTTTGACCAAGATTGGAGCTGCATGTATAATGGGTTGTTAGAGTTTCAAGACACAAACATGGATTTCAACAAAGGCGGTGAAGATTTAATTGACATATTCGATGGCTCGGGTTTTGTGGAAGACATTGGTTTAATGTTCAACACAGAAGAACCTTATGGTGGTGTTGAAAGTGATATCAATATTAGTGAAGTTTTGAAGGGTATTGATTGTGGAGGATTATTAAATGGAGATGTTGGAAACATGTTTGTGAATGATGATGATAACAAGAAGGAGAAGGAACTATTATCCTTAGAATCTTCTTCACCATCATCTTCAACAACTACATTTTCTTTGTAA 1251 0.3749 MKRSPPSSSSSSSSSIGFENPIQSEKKRGAKSKNPKNNLNLKSQNFKQKKNQTNGGSRRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQSKKGKQVYLGAYDTEEAAARTYDLAALKYWGKDATLNFPIETYAKEFEEMDKSSKEEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAVAYDKAAIEYRGMNAVTNFDISNYMDKSKNKKNDETEQTEQQQTITEIVPNNSSDSEELSEEQTTATPPTEMEPQNQQVQQHQQHVSPIVHEEHTIVNVMDHYFDQDWSCMYNGLLEFQDTNMDFNKGGEDLIDIFDGSGFVEDIGLMFNTEEPYGGVESDINISEVLKGIDCGGLLNGDVGNMFVNDDDNKKEKELLSLESSSPSSSTTTFSL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1516 416 CDD AP2 163 224 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 356 - -
Tpr7g1516 416 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 356 - -
Tpr7g1516 416 MobiDBLite consensus disorder prediction 34 61 - -
Tpr7g1516 416 SMART rav1_2 164 228 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 SMART rav1_2 62 134 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 CDD AP2 61 129 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 MobiDBLite consensus disorder prediction 230 287 - -
Tpr7g1516 416 MobiDBLite consensus disorder prediction 1 63 - -
Tpr7g1516 416 Gene3D AP2/ERF domain 62 130 IPR036955 GO:0003700|GO:0006355
Tpr7g1516 416 Gene3D AP2/ERF domain 163 224 IPR036955 GO:0003700|GO:0006355
Tpr7g1516 416 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 PRINTS Ethylene responsive element binding protein signature 204 224 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 SUPERFAMILY DNA-binding domain 61 130 IPR016177 GO:0003677
Tpr7g1516 416 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g1516 416 ProSiteProfiles AP2/ERF domain profile. 164 222 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 ProSiteProfiles AP2/ERF domain profile. 62 128 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 Pfam AP2 domain 163 215 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 Pfam AP2 domain 62 120 IPR001471 GO:0003700|GO:0006355
Tpr7g1516 416 SUPERFAMILY DNA-binding domain 163 224 IPR016177 GO:0003677
Tpr7g1516 416 MobiDBLite consensus disorder prediction 241 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1516 Tpr-Chr7 16958858 16965088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1516 33 230 AP2-EREBP Transcription Factor Family AT5G57390 64.646 6.52e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Tpr7g1516 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1516 - - gmx:100527432 480.33