Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1470 ATGAATGATCTTAGAGATAAATTTCCTATTGGAATGCGTGTTCTTGCTGTTGATGATGATAGAACATGTCTCAAGATTTTGGAAAAACTTCTCCTAAAGTGTCAATACCATGTAACCACTGCTCAAAACGCGATAACGGCGCTGAATTTGTTGAGAGAAAACAAAAACAATTTTGACTTAGTAATCAGCAATGTTCATATGCCTGACATGGATGGATTTAAGCTGCTTGAGCTTGTTGGACTTGAGATGGACTTACCTGTCATAATGTTTTCGGCAAACGATGATCCGAAGATGGTGCTTAAAGGAATTACTCATGGTGCTTGTGATTATCTGTTGAAACCTGTTATACTGAAAGAGGTACAAACCATTTGGCAGCATGTAATCAGGAAGAAAAAGACTAGCAAAAGAAGCAACCACGACGTGCGAAATTCTGATGGCGGAAATGGAATAGATTCTGCTTTGACAGGAAATTCTGATCAAAATGATAGGCCTTCTAGTTCTAGAAAAAGGAAGGAAAAGAATGAAGATGATGTTGATGAGGAGAATGAGGATGATCAAGATAATGATGATCCAACTGCGCAAAAGAAGGCTCGAGTTGTTTGGACCCCTGCCTTACACCGCAAGTTTGTTGCTGCTGTTAATCAATTAGGCATCGACAAGGCTGTGCCGAAAAAGATTCTTGACTTGATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCCAGCCATCTTCAGAAATATAGACTCTATCTGAAAAGGATTAGTGAAGGGGAAAACCAACAAGCTAATATGGCAGCATTGTTAGGTAGTTCTTCGGATACATCCTATTTAGGAATGACTTCTCTCGGTGGCTCTACACAGTTTCATAACAATCCTTTCAAATCCTTTGCATCTGGTGGTAGTAGGAGTAATATATTCAACACTCCTACTAATGTGAATATGCACGGATTCTCTTCTTCTGGAACCCCTCAGCTGAATCACACACATAATGGTCAGCTAAAGTTCCAATCGGCCATGACTCACGATAATCTGAACAATGTTCTAAAAATGCCGATGTCTTCTGCAGGACTTGATCAATTGTTACACAGTAAAGGTATTACTGTTAGTCCTAATATTCAAAACATGACCAATAAACTTCCAGATTATTACAAGCCAAAAGTAACAATGAGTTGCACAAACAATGCCTTGATTTTAGAATCGAATCCTCAAGAGAAACAAGTAGCCTCTCAGAATTCACAGTATCTTCCTTCACTTGAAAACCGAAGGTGCAATGGTATTTGGTCAAACACTATGCAATTACCTGGAACAAACTCTTATCTTCAAAGAGAAGGTTTCGGCCATGGTTCTGCGTCTCATAAGGATAACAGAAATGCTGCTATACCTCATACAGAAGCATATGAATTATGCAATAATGTGCCATTTCAAGGTCGGGACAATAACCATAATAATCATGATGGAAGTTACCATTCTTCTCATGTGGTTGGAAGTTCAATAGGCTCTATGAATCCTGCTGTGAATGCTGTTGAACCAGAAGAAAACTTGGACTATAATTATTGTGATTCGCTACAAATGAAGCGTGATCGTACCACTGAGCTAACAGAAGGACCGTCATTCAAACCACATCAGGCATATATGATGAACAACCAGATGAAGTTTCAAAACAGTGGAATCTCTAATAATCCTGGTTCACTCGAAGACGCTTTCCGTGACATGATCAAGCAGAAACAATTATATGCTAATTTCTCTGGTGGGACAATGTGA 1761 0.3907 MNDLRDKFPIGMRVLAVDDDRTCLKILEKLLLKCQYHVTTAQNAITALNLLRENKNNFDLVISNVHMPDMDGFKLLELVGLEMDLPVIMFSANDDPKMVLKGITHGACDYLLKPVILKEVQTIWQHVIRKKKTSKRSNHDVRNSDGGNGIDSALTGNSDQNDRPSSSRKRKEKNEDDVDEENEDDQDNDDPTAQKKARVVWTPALHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISEGENQQANMAALLGSSSDTSYLGMTSLGGSTQFHNNPFKSFASGGSRSNIFNTPTNVNMHGFSSSGTPQLNHTHNGQLKFQSAMTHDNLNNVLKMPMSSAGLDQLLHSKGITVSPNIQNMTNKLPDYYKPKVTMSCTNNALILESNPQEKQVASQNSQYLPSLENRRCNGIWSNTMQLPGTNSYLQREGFGHGSASHKDNRNAAIPHTEAYELCNNVPFQGRDNNHNNHDGSYHSSHVVGSSIGSMNPAVNAVEPEENLDYNYCDSLQMKRDRTTELTEGPSFKPHQAYMMNNQMKFQNSGISNNPGSLEDAFRDMIKQKQLYANFSGGTM* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1470 586 PIRSF RR_ARR_type-B 1 586 IPR017053 GO:0003677|GO:0003700|GO:0009736
Tpr7g1470 586 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 570 IPR045279 GO:0009736
Tpr7g1470 586 SUPERFAMILY CheY-like 11 135 IPR011006 -
Tpr7g1470 586 MobiDBLite consensus disorder prediction 129 195 - -
Tpr7g1470 586 SUPERFAMILY Homeodomain-like 194 253 IPR009057 -
Tpr7g1470 586 Pfam Response regulator receiver domain 14 120 IPR001789 GO:0000160
Tpr7g1470 586 Gene3D - 11 144 - -
Tpr7g1470 586 Gene3D - 192 255 - -
Tpr7g1470 586 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 196 249 IPR006447 GO:0003677
Tpr7g1470 586 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 570 - -
Tpr7g1470 586 Pfam Myb-like DNA-binding domain 198 248 IPR001005 -
Tpr7g1470 586 MobiDBLite consensus disorder prediction 143 162 - -
Tpr7g1470 586 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Tpr7g1470 586 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 193 252 IPR017930 -
Tpr7g1470 586 CDD REC_typeB_ARR-like 14 128 - -
Tpr7g1470 586 SMART REC_2 12 124 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1470 Tpr-Chr7 16299343 16303147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1470 6 586 Response Regulator Gene Family AT2G25180 41.531 4.36e-116 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Tpr7g1470 Response_reg 3.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1470 - K14491 cam:101500109 622.854