Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1466 ATGAATTGGCCCAAGGGAGCTAAAGCTCAGGAAGTAGCTACAAATTTCAACTCAAACAATCCTTTTTTCACAATTCTCATAAAGCCGATTAATCTGGTACAAAATCGGCTGTATATACCGAGTTTAGAAGGGGTTATTGAGAACAAGGAGAAGAATGTGATGCTGCAGATTGGGAAAAGATCATGGAATGTGAAATTGCTCCCTTTTTACAGTGCTACAAATAAATATGGCCGTCGTCTTTCAGCCGGTTGGTCATTGTTTGCAAGTGAAAGTGGACTGAAACCAGGAGATGTTTATGTCTTTGAACTGATAAACAAGAGTGATTTAGTTTTTAAAGTTCATGTTTTCTGA 351 0.3789 MNWPKGAKAQEVATNFNSNNPFFTILIKPINLVQNRLYIPSLEGVIENKEKNVMLQIGKRSWNVKLLPFYSATNKYGRRLSAGWSLFASESGLKPGDVYVFELINKSDLVFKVHVF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1466 116 SMART B3_2 22 114 IPR003340 GO:0003677
Tpr7g1466 116 Gene3D - 4 116 IPR015300 -
Tpr7g1466 116 PANTHER B3 DOMAIN-CONTAINING 7 116 - -
Tpr7g1466 116 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 116 - -
Tpr7g1466 116 ProSiteProfiles B3 DNA-binding domain profile. 22 116 IPR003340 GO:0003677
Tpr7g1466 116 SUPERFAMILY DNA-binding pseudobarrel domain 16 116 IPR015300 -
Tpr7g1466 116 CDD B3_DNA 22 116 IPR003340 GO:0003677
Tpr7g1466 116 Pfam B3 DNA binding domain 22 116 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1466 Tpr-Chr7 16277587 16278447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1466 8 116 REM Transcription Factor Family AT1G49480 32.743 6.20e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr7g1466 B3 3.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1466 - - ccaj:109795878 140.969