Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1465 ATGGCTAAGAGAAATGCTACTCTCTCCGTCCGTTTCTTCAAGATCATCCTCCAAACTAATCTTCAAACACTTAAAATACCAAATAAGTTTACAAAGAGTTATGGAGTTGGTCTATCAAATCCAGTGTTGATCAAGCCTCCTGATGGCACCAACTGGAAAGTTTATTGGAAAAAAGTCAATGGTGAGATTTGGTTTGAAAAAGGTTGGAAATCTTTTACTCAAAATTACTCTCTACAACAAGGTTGTTTGGTGTTATTTAAATATAGAAAAGGAACTTCCAACTTCAATGTGATTATACTTGGCCAGAATACATTAGAAATAGAGTATGATCCTTCATCTTACACTGATGATGATAAAAATGAAAATGTTGGCGATAGTGACGATGAATCGGTTAAGATTTTGGATGAAAAGAACAATAGTACTATTGATCATAGTGATGATGAATCAGTTGAGATTTTGGATGAATGGCCTAAACGGAAGAAGAACAAACAAAGGTCACCAATAGGTCGATCTCCTCGACCACATAAGAAAGTTAGAGGTGAGACTGAGAACACTACTAAAAGTACTTCATCCTTGAATTGGCCAAAGGAAGCTAAAGCTCAGAAAGTAGCTGCAAAATTCAATTCAAGCAATCCTTTTTTCACAATTCTCATAAAGCCTTATCAACTGGTAAAAGGTCAGATGTGTGTACCAAGTTTAAAAGGTGTTATTGAGAACAAAGAGAAGCATGTGATGCTGCAGATTGGAAAAAGATCATGGAATCTGAAACTGCTTTGTAGTGACGATAAAAATGGTCGACGCCTTTCAGCCGGTTGGTCAAAGTTTGCAAGTGAAAGTGGACTGCAACCAGGAGATGTTTGTATCTTTGAACTGATAAACAAGAAAGATTTAGTTTTTAATGTTCATGTTTTTTAA 915 0.3574 MAKRNATLSVRFFKIILQTNLQTLKIPNKFTKSYGVGLSNPVLIKPPDGTNWKVYWKKVNGEIWFEKGWKSFTQNYSLQQGCLVLFKYRKGTSNFNVIILGQNTLEIEYDPSSYTDDDKNENVGDSDDESVKILDEKNNSTIDHSDDESVEILDEWPKRKKNKQRSPIGRSPRPHKKVRGETENTTKSTSSLNWPKEAKAQKVAAKFNSSNPFFTILIKPYQLVKGQMCVPSLKGVIENKEKHVMLQIGKRSWNLKLLCSDDKNGRRLSAGWSKFASESGLQPGDVCIFELINKKDLVFNVHVF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1465 304 CDD B3_DNA 213 304 IPR003340 GO:0003677
Tpr7g1465 304 SUPERFAMILY DNA-binding pseudobarrel domain 207 304 IPR015300 -
Tpr7g1465 304 SMART B3_2 12 103 IPR003340 GO:0003677
Tpr7g1465 304 SMART B3_2 213 302 IPR003340 GO:0003677
Tpr7g1465 304 Gene3D - 195 304 IPR015300 -
Tpr7g1465 304 ProSiteProfiles B3 DNA-binding domain profile. 9 103 IPR003340 GO:0003677
Tpr7g1465 304 PANTHER B3 DOMAIN-CONTAINING 8 304 - -
Tpr7g1465 304 MobiDBLite consensus disorder prediction 112 195 - -
Tpr7g1465 304 Pfam B3 DNA binding domain 20 98 IPR003340 GO:0003677
Tpr7g1465 304 Pfam B3 DNA binding domain 213 304 IPR003340 GO:0003677
Tpr7g1465 304 Gene3D - 5 104 IPR015300 -
Tpr7g1465 304 ProSiteProfiles B3 DNA-binding domain profile. 213 304 IPR003340 GO:0003677
Tpr7g1465 304 CDD B3_DNA 11 100 IPR003340 GO:0003677
Tpr7g1465 304 SUPERFAMILY DNA-binding pseudobarrel domain 11 102 IPR015300 -
Tpr7g1465 304 MobiDBLite consensus disorder prediction 112 162 - -
Tpr7g1465 304 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1465 Tpr-Chr7 16275889 16277483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1465 12 304 B3 DNA Binding Superfamily AT3G18990 27.545 6.31e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr7g1465 B3 4.9e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1465 - - mtr:MTR_3g061330 335.88