Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1459 ATGATCCCAATAGACATCCTACGACATCTCGAAATTTCTCTTGTGAGCTGTGTTATTGTGTTGTTGACGGCGTCAAAGCCTATCAAAATGCCTGATTCACCTCATGTAACCATGAGTAACAACAATGTATCAGAAGAAGTTGACAAAACTGAACAAAGTTGTGCAAATGAAAATACAGAAAATGATGATATTAGAAAGGTGAATAATCAGGAAACAAAAGATGGTTTGACAAATGAAAACAATGCAAAGAAAACAACAAATAAGCCAGCAAAATCACCATCATTTTCATCATCTAGGCCTCAAAAGTTAGAATCACACATGAGGAATTTCTCTGAATTTTCCAATACTCCTAGAGATAGATCAAGTCCAAGAATGATTTCAAAGAGCGGACCGAATTCGCGTAGTGATAGTTTAGAAAGCACAAGTACACCAATATTTAAGCCACATACAGGAGGTGATGTGAGATGGGATGCAATTAACTTGGTTACAAGAGTGTCACAATGTAATCTCAACTTTGGTCATTTTCGGCTTGTGAAGCGTGTCGGTTATGGTGACATCGGAAGCGTTTATCTTGTTGAACTTAAAGGGACAAGAACATTTTATGCTATGAAAGTAATGGATAAGGCTTCACTTGCTAGTAGAAACAAGCTTCTTAGAGCACAAACTGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTGTATTCTCATTTTGAAAATGACAAGTATTATTGTTTGATCATGGAGTTTTGTAGTTGTGGTAGTTTGCATAGCCTCAGAATGAAGCAACCCAACAAGCATTTCACTGAAAATGCTGCAAGGTTTTATTGTTCAGAGATTCTATTAGCATTGGAGTACCTCCACATGTTAGGAATAGTATACAGAGATTTAAAACCAGAAAACGTTCTAGTCCGTGACGAAGGCCACATAATGCTATCGGATTTTGATTTATCCCTTCGATGTTCGGTTAACCCTACACTCGTCAAGTCCTCCTCCGCACACATAACCACCACCGCGACATCCATTGGAATCCTAGACGACGATCACGCCGTACAAGGTTGTATGCAACCATCAAGTTACTTGTTTCCAAGAATCCTCCCATCTAAAAAAAACCGAAAATCAAAATCAGATTTCGGTCTCATCCGTCTACCAGAATTAATGGCAGAACCAACGAACGTCAGATCAATGTCGTTCGTTGGGACACATGAATATCTTGCACCGGAAATCGTGCGTGGTGAAGGACACGGTAGTGCTGTTGATTGGTGGACATTTGGGATATTTTTATACGAGCTTTTAACCGGAACAACGCCGTTTAAAGGTAACGGAAACCGTGCTACGCTTTTCAATGTTGTAGGACAACCTTTAAGGTTTCCTGACTATCCTTCTTGTAGTCCTATTGCTAAAGATCTTATTAGAGGATTGTTGGTTAAGGAACCTCAAAAAAGATTTGCTTATAAAAGAGGTGCTACTGAGATTAAACAACACCCATTTTTTGAAGGGGTTAATTGGGCTTTGATTCGAAGTGCAACTCCACCTATTATACCAGAACCATTTGATTTTAGTCAGTATGTTAGTAAGGAAACTGTTGTAGCTGATGTTGCTGATAAGAAGATTGTTGATATTGTGAGTGATAAAAATAATAGTAAGGTGCAACATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG 1701 0.3839 MIPIDILRHLEISLVSCVIVLLTASKPIKMPDSPHVTMSNNNVSEEVDKTEQSCANENTENDDIRKVNNQETKDGLTNENNAKKTTNKPAKSPSFSSSRPQKLESHMRNFSEFSNTPRDRSSPRMISKSGPNSRSDSLESTSTPIFKPHTGGDVRWDAINLVTRVSQCNLNFGHFRLVKRVGYGDIGSVYLVELKGTRTFYAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSHFENDKYYCLIMEFCSCGSLHSLRMKQPNKHFTENAARFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHITTTATSIGILDDDHAVQGCMQPSSYLFPRILPSKKNRKSKSDFGLIRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLTGTTPFKGNGNRATLFNVVGQPLRFPDYPSCSPIAKDLIRGLLVKEPQKRFAYKRGATEIKQHPFFEGVNWALIRSATPPIIPEPFDFSQYVSKETVVADVADKKIVDIVSDKNNSKVQHDSSYEDFEYF* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1459 566 MobiDBLite consensus disorder prediction 34 49 - -
Tpr7g1459 566 Coils Coil 40 60 - -
Tpr7g1459 566 CDD STKc_phototropin_like 174 521 - -
Tpr7g1459 566 SUPERFAMILY Protein kinase-like (PK-like) 160 527 IPR011009 -
Tpr7g1459 566 Gene3D Phosphorylase Kinase; domain 1 174 258 - -
Tpr7g1459 566 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 40 566 - -
Tpr7g1459 566 Pfam Protein kinase domain 380 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1459 566 Pfam Protein kinase domain 176 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1459 566 SMART serkin_6 175 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1459 566 MobiDBLite consensus disorder prediction 73 146 - -
Tpr7g1459 566 Gene3D Transferase(Phosphotransferase) domain 1 259 329 - -
Tpr7g1459 566 ProSiteProfiles Protein kinase domain profile. 175 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g1459 566 MobiDBLite consensus disorder prediction 50 72 - -
Tpr7g1459 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Tpr7g1459 566 MobiDBLite consensus disorder prediction 33 146 - -
Tpr7g1459 566 Gene3D Transferase(Phosphotransferase) domain 1 380 520 - -
Tpr7g1459 566 PANTHER FLIPPASE KINASE 1-RELATED 40 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1459 Tpr-Chr7 16177260 16180256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g1459 138 566 AGC Kinase Gene Family AT1G79250 70.419 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr7g1459 Pkinase 2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1459 - - gmx:100802478 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1459 7 16177260 16180256 Tpr7g1459 7 16177260 16180256 ECH
Tpr7g3100 7 38322043 38326049 Tpr7g1459 7 16177260 16180256 PCT