LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1459	ATGATCCCAATAGACATCCTACGACATCTCGAAATTTCTCTTGTGAGCTGTGTTATTGTGTTGTTGACGGCGTCAAAGCCTATCAAAATGCCTGATTCACCTCATGTAACCATGAGTAACAACAATGTATCAGAAGAAGTTGACAAAACTGAACAAAGTTGTGCAAATGAAAATACAGAAAATGATGATATTAGAAAGGTGAATAATCAGGAAACAAAAGATGGTTTGACAAATGAAAACAATGCAAAGAAAACAACAAATAAGCCAGCAAAATCACCATCATTTTCATCATCTAGGCCTCAAAAGTTAGAATCACACATGAGGAATTTCTCTGAATTTTCCAATACTCCTAGAGATAGATCAAGTCCAAGAATGATTTCAAAGAGCGGACCGAATTCGCGTAGTGATAGTTTAGAAAGCACAAGTACACCAATATTTAAGCCACATACAGGAGGTGATGTGAGATGGGATGCAATTAACTTGGTTACAAGAGTGTCACAATGTAATCTCAACTTTGGTCATTTTCGGCTTGTGAAGCGTGTCGGTTATGGTGACATCGGAAGCGTTTATCTTGTTGAACTTAAAGGGACAAGAACATTTTATGCTATGAAAGTAATGGATAAGGCTTCACTTGCTAGTAGAAACAAGCTTCTTAGAGCACAAACTGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTGTATTCTCATTTTGAAAATGACAAGTATTATTGTTTGATCATGGAGTTTTGTAGTTGTGGTAGTTTGCATAGCCTCAGAATGAAGCAACCCAACAAGCATTTCACTGAAAATGCTGCAAGGTTTTATTGTTCAGAGATTCTATTAGCATTGGAGTACCTCCACATGTTAGGAATAGTATACAGAGATTTAAAACCAGAAAACGTTCTAGTCCGTGACGAAGGCCACATAATGCTATCGGATTTTGATTTATCCCTTCGATGTTCGGTTAACCCTACACTCGTCAAGTCCTCCTCCGCACACATAACCACCACCGCGACATCCATTGGAATCCTAGACGACGATCACGCCGTACAAGGTTGTATGCAACCATCAAGTTACTTGTTTCCAAGAATCCTCCCATCTAAAAAAAACCGAAAATCAAAATCAGATTTCGGTCTCATCCGTCTACCAGAATTAATGGCAGAACCAACGAACGTCAGATCAATGTCGTTCGTTGGGACACATGAATATCTTGCACCGGAAATCGTGCGTGGTGAAGGACACGGTAGTGCTGTTGATTGGTGGACATTTGGGATATTTTTATACGAGCTTTTAACCGGAACAACGCCGTTTAAAGGTAACGGAAACCGTGCTACGCTTTTCAATGTTGTAGGACAACCTTTAAGGTTTCCTGACTATCCTTCTTGTAGTCCTATTGCTAAAGATCTTATTAGAGGATTGTTGGTTAAGGAACCTCAAAAAAGATTTGCTTATAAAAGAGGTGCTACTGAGATTAAACAACACCCATTTTTTGAAGGGGTTAATTGGGCTTTGATTCGAAGTGCAACTCCACCTATTATACCAGAACCATTTGATTTTAGTCAGTATGTTAGTAAGGAAACTGTTGTAGCTGATGTTGCTGATAAGAAGATTGTTGATATTGTGAGTGATAAAAATAATAGTAAGGTGCAACATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG	1701	0.3839	MIPIDILRHLEISLVSCVIVLLTASKPIKMPDSPHVTMSNNNVSEEVDKTEQSCANENTENDDIRKVNNQETKDGLTNENNAKKTTNKPAKSPSFSSSRPQKLESHMRNFSEFSNTPRDRSSPRMISKSGPNSRSDSLESTSTPIFKPHTGGDVRWDAINLVTRVSQCNLNFGHFRLVKRVGYGDIGSVYLVELKGTRTFYAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSHFENDKYYCLIMEFCSCGSLHSLRMKQPNKHFTENAARFYCSEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHITTTATSIGILDDDHAVQGCMQPSSYLFPRILPSKKNRKSKSDFGLIRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLTGTTPFKGNGNRATLFNVVGQPLRFPDYPSCSPIAKDLIRGLLVKEPQKRFAYKRGATEIKQHPFFEGVNWALIRSATPPIIPEPFDFSQYVSKETVVADVADKKIVDIVSDKNNSKVQHDSSYEDFEYF*	567

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr7g1459	566	MobiDBLite	consensus disorder prediction	34	49	-	-
Tpr7g1459	566	Coils	Coil	40	60	-	-
Tpr7g1459	566	CDD	STKc_phototropin_like	174	521	-	-
Tpr7g1459	566	SUPERFAMILY	Protein kinase-like (PK-like)	160	527	IPR011009	-
Tpr7g1459	566	Gene3D	Phosphorylase Kinase; domain 1	174	258	-	-
Tpr7g1459	566	PANTHER	SERINE/THREONINE-PROTEIN KINASE AGC1-5	40	566	-	-
Tpr7g1459	566	Pfam	Protein kinase domain	380	502	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tpr7g1459	566	Pfam	Protein kinase domain	176	329	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tpr7g1459	566	SMART	serkin_6	175	502	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Tpr7g1459	566	MobiDBLite	consensus disorder prediction	73	146	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1459	Tpr-Chr7	16177260	16180256	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g1459	138	566	AGC Kinase Gene Family	AT1G79250	70.419	0.0	640

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Tpr7g1459		Pkinase	2e-36	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g1459	-		-	gmx:100802478	699.123

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g1459	7	16177260	16180256	Tpr7g1459	7	16177260	16180256	ECH
	Tpr7g3100	7	38322043	38326049	Tpr7g1459	7	16177260	16180256	PCT

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