Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1439 ATGGCAACAAATAGCGCTGGATCCAATGATCCTACTGTTAATAGAAGACAAACTAAACGACCCAAGTACTCGAAGTTTACGCAACAAGAACTTCCAGCATGCAAGCCTATTCTAACACCACAAGCGGTTATTTCAGCATTCTTGATTGTCACCGCCATATTTATCCCTATTGGAGTTGCTTCGCTTATTGCTTCACGAGATGTTGTTGAAATTGTTGATAGGTATGAGGCAGCGTGTGTGCCGTCAAATTGGACAGACAAAATAGCATACATTCAGAGTGGTGCCGATAAAACTTGCAAAAGGGAGCTGCATGTTGAGAAGCGAATGAAGTCTCCTATCTATGTTTACTATCAGCTTGACAACTTTTACCAGAATCATCGTCGGTATGTGAAAAGCCGAAATGATGAGCAATTGAGGGATGCTGGAAAAGGAAACTCAACAAGTGGTTGTGACCCTGAAAGCAATGTAGATGGAGTGCCAATCGTACCTTGTGGTCTTATAGCTTGGAGCATGTTCAATGATACATACAGCTTCTCGCGCAACAACAATAATGTGACAGTGAACAAGAAAGGAATCTCATGGAAGAGTGATAGGGATCACAAATTCGGAAGTGATGTTTTCCCTAAAAATTTCCAGAATGGTACTATTAAAGGTGGTGCTAGTCTCAATGAAACAATACCGTTGAGTCAGCAAGAGGATCTTATCGTTTGGATGCGAACTGCGGCTTTGCCAACTTTTAGGAAGCTTTATGGAAAGATTGAGGTGGATTTGGAGAAAGGTGATGTGATAAATGTGGTATTGCAGAATAACTACAACACATACAGTTTTAGTGGCAAGAAGAAACTTGTATTGTCAACTACTAGTTGGCTTGGTGGAAAGAATGACTTCCTTGGCATTGCTTATCTCAGTGTTGGAGGATTGAGTTTCTTTTTGGCAATGGCTTTTGCTATTGTATATTTTGTCAAGCCAAGGCAACTTGGCGATCCATCATACTTGTCATGGAATAGGAATGCAGCAGGGCAGTGA 1026 0.4123 MATNSAGSNDPTVNRRQTKRPKYSKFTQQELPACKPILTPQAVISAFLIVTAIFIPIGVASLIASRDVVEIVDRYEAACVPSNWTDKIAYIQSGADKTCKRELHVEKRMKSPIYVYYQLDNFYQNHRRYVKSRNDEQLRDAGKGNSTSGCDPESNVDGVPIVPCGLIAWSMFNDTYSFSRNNNNVTVNKKGISWKSDRDHKFGSDVFPKNFQNGTIKGGASLNETIPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKGDVINVVLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLSVGGLSFFLAMAFAIVYFVKPRQLGDPSYLSWNRNAAGQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1439 341 PIRSF Lem3/Cdc50 2 337 IPR005045 GO:0016020
Tpr7g1439 341 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 62 325 IPR005045 GO:0016020
Tpr7g1439 341 PANTHER CELL CYCLE CONTROL PROTEIN 50 6 341 IPR005045 GO:0016020
Tpr7g1439 341 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g1439 341 MobiDBLite consensus disorder prediction 133 154 - -
Tpr7g1439 341 PANTHER ALA-INTERACTING SUBUNIT 6 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1439 Tpr-Chr7 15757473 15761561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g1439 - - gmx:100791515 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1439 7 15757473 15761561 Tpr7g1439 7 15757473 15761561 ECH
Tpr7g3129 7 38774503 38779473 Tpr7g1439 7 15757473 15761561 PCT