LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g1437	ATGTTACCTACAACAACTACAAGGAAGTCTCTGCCAGTTCCTTTAGGCACAGGTTTAAGGGTTTCTTTAGGTGATCAGAAGAATAGTTCAAATGGACGTCAATCAGTTGCTACAAAGGATAGGTTTGCAAAGAAGCCTATGTTGCCAACAACAAGCATTTCAAGGAAGTCGCTGCCAGTTCCAAGGAGGGTAAACAGGGTTGAGAGTAATAACACAAAGGAAAATGCTGGAAGTTCTGAAAGAGCTAATGGCCAAACTGGTCTTCCAAGTAAGCTGACAACAGACAGAAGAGTTAGTTCCCAACTAATTAATACAAGGAGCCATCTATTGAAGACTCGAGTTAGTGATGGCTTTATTCAAATGGTTACAAGTAATGCTTACCAAGCATCCTCAAGGAAGTCCGCCAAGCCTATTGTTAAGACCACACTCAAGGCTTCTACATCTCAGAGGACTCTAAAATCTAAATCCATATCAGGCGAGAACATATCAAAACCAACCACCGCAATAGCATCTAAGGATGAGGCAAAAGTTTCTTCATCTCTTCCCGAGAATAGTTCCGTGGTTGTTTCCGATGACGCAAATCAAACCCATCTTCCATCTGAAGGGGAGAGCAGTCTGAAAACAGATTTATCAGAGTTGATTCCAAGAAAAAGATCCAGCCGTCGGAAATCTTATACAACTTCATTAATGGAAAAATCTAAGATTCTCAAGGAAAATGGTGAAGTTAGGGCGCAGGATAACCTACCAAATATAGATGATGAATGTAATCATCTAGAAGTTTCTGAATACATTGATGATATATATCAGTACTATTGGGATACCGAGGCACATAGTCAAGCTCTATCAAATTACATGTCAATTCAGACAGAGATTACTCCTCACATGCGGGGAGTATTAGTCAACTGGCTAATTGAGGTACACTTCAAATATGATTTGATGCCTGAGACCCTATATCTGACAGTGACACTGTTGGATCAATATCTTTCCCAAGTGAACATAAAAACAAGTGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAGTATGAGGACTTTTGGCACCCAAGGGTAAAAGATTTGATTAGCATCTCAGCCGAGTCGTATACTAGAGATCAGATGCTTGGAATGGAAAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATGCTCCCACTCCTTACGTTTTTATGGTTAGGTTTCTCAAGGCTGCACAATCAGATATGAAGCTTGAACACATGTCATTCTTTCTCATTGACCTATGCTTAGTTGAATATGAAGCTTTAGCGTTCAAGCCTTCATTACTATGTGCATCAGCTCTCTATGTTGCACGTTGTACCTTGAAAGTAACCCCAACATGGACACCACTACTTCAGAAGCATGCGCGCTACGAAGTTTCACAGATCAGGGATTGTGCGGATATGATATTGAAATTCCATAAAGCTGCTGGGAAGGGAAAGTTAAAGGTCGCTTATGAAAAATATTTCAGAAAGGAACTCAGTGGGGTCGCTGCAGTGAAGCCGTTGGATAGACTTCCCCATTGA	1551	0.4062	MLPTTTTRKSLPVPLGTGLRVSLGDQKNSSNGRQSVATKDRFAKKPMLPTTSISRKSLPVPRRVNRVESNNTKENAGSSERANGQTGLPSKLTTDRRVSSQLINTRSHLLKTRVSDGFIQMVTSNAYQASSRKSAKPIVKTTLKASTSQRTLKSKSISGENISKPTTAIASKDEAKVSSSLPENSSVVVSDDANQTHLPSEGESSLKTDLSELIPRKRSSRRKSYTTSLMEKSKILKENGEVRAQDNLPNIDDECNHLEVSEYIDDIYQYYWDTEAHSQALSNYMSIQTEITPHMRGVLVNWLIEVHFKYDLMPETLYLTVTLLDQYLSQVNIKTSDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFLKAAQSDMKLEHMSFFLIDLCLVEYEALAFKPSLLCASALYVARCTLKVTPTWTPLLQKHARYEVSQIRDCADMILKFHKAAGKGKLKVAYEKYFRKELSGVAAVKPLDRLPH*	517

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr7g1437	516	PANTHER	CYCLINS	80	513	IPR039361	-
Tpr7g1437	516	MobiDBLite	consensus disorder prediction	22	37	-	-
Tpr7g1437	516	MobiDBLite	consensus disorder prediction	1	99	-	-
Tpr7g1437	516	SUPERFAMILY	Cyclin-like	394	513	IPR036915	-
Tpr7g1437	516	MobiDBLite	consensus disorder prediction	50	99	-	-
Tpr7g1437	516	Pfam	Cyclin, C-terminal domain	394	508	IPR004367	-
Tpr7g1437	516	PANTHER	CYCLIN-B3-1-RELATED	80	513	-	-
Tpr7g1437	516	CDD	CYCLIN	295	384	IPR013763	-
Tpr7g1437	516	CDD	CYCLIN	392	479	IPR013763	-
Tpr7g1437	516	SMART	Cyclin_C_2	394	511	IPR004367	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g1437	Tpr-Chr7	15733528	15739516	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g1437	38	515	Core Cell Cycle Gene Families	AT1G16330	51.760	3.43e-160	468

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g1437	K21777		-	gmx:100808850	729.169

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g1437	7	15733528	15739516	Tpr7g1437	7	15733528	15739516	ECH

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